RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CTIFO43310 598 aaKnown RBP27.39■■□□□ 1.97
TMEM260-207ENST00000555497 NRDCO43847 1150 aa27.39■■□□□ 1.97
TMEM260-207ENST00000555497 NELFBQ8WX92 580 aa27.39■■□□□ 1.97
TMEM260-207ENST00000555497 CNKSR1Q969H4 720 aa27.39■■□□□ 1.97
TMEM260-207ENST00000555497 AK8Q96MA6 479 aa27.39■■□□□ 1.97
TMEM260-207ENST00000555497 MMTAG2Q9BU76 263 aaKnown RBP27.39■■□□□ 1.97
TMEM260-207ENST00000555497 DHX36Q9H2U1 1008 aaKnown RBP27.38■■□□□ 1.97
TMEM260-207ENST00000555497 PAK1Q13153 545 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 UBE2SQ16763 222 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 KMT5BQ4FZB7 885 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 MTMR8Q96EF0 704 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 MTMR9Q96QG7 549 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 PI4KBQ9UBF8 816 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 RGPD3A6NKT7 1758 aaPredicted RBP27.37■■□□□ 1.97
TMEM260-207ENST00000555497 RGPD4Q7Z3J3 1758 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 SLC37A4O43826 429 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 TDP2O95551 362 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 EEF2P13639 858 aaKnown RBP27.37■■□□□ 1.97
TMEM260-207ENST00000555497 PBX1P40424 430 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 GPATCH4Q5T3I0 446 aaKnown RBP27.37■■□□□ 1.97
TMEM260-207ENST00000555497 SIAH1Q8IUQ4 282 aa27.37■■□□□ 1.97
TMEM260-207ENST00000555497 EN1Q05925 392 aaPredicted RBP27.36■■□□□ 1.97
TMEM260-207ENST00000555497 ZSCAN29Q8IWY8 852 aaPredicted RBP27.36■■□□□ 1.97
TMEM260-207ENST00000555497 IGSF22Q8N9C0 903 aa27.36■■□□□ 1.97
TMEM260-207ENST00000555497 RIC8AQ9NPQ8 531 aa27.36■■□□□ 1.97
TMEM260-207ENST00000555497 SERPINA10Q9UK55 444 aa27.36■■□□□ 1.97
TMEM260-207ENST00000555497 YDJCA8MPS7 323 aa27.36■■□□□ 1.97
TMEM260-207ENST00000555497 CERKLQ49MI3 558 aaPredicted RBP27.36■■□□□ 1.97
TMEM260-207ENST00000555497 TDRD3Q9H7E2 651 aaKnown RBP27.36■■□□□ 1.97
TMEM260-207ENST00000555497 TXKP42681 527 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 ADSSL1Q8N142 457 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 ZBTB5O15062 677 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 CLK2P49760 499 aaKnown RBP27.35■■□□□ 1.97
TMEM260-207ENST00000555497 ORC2Q13416 577 aaPredicted RBP27.35■■□□□ 1.97
TMEM260-207ENST00000555497 KCNB1Q14721 858 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 TATDN1Q6P1N9 297 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 MKL1Q969V6 931 aa27.35■■□□□ 1.97
TMEM260-207ENST00000555497 SEPT2Q15019 361 aa27.34■■□□□ 1.97
TMEM260-207ENST00000555497 KRT31Q15323 416 aa27.34■■□□□ 1.97
TMEM260-207ENST00000555497 CAMKK2Q96RR4 588 aa27.34■■□□□ 1.97
TMEM260-207ENST00000555497 BAG1Q99933 345 aaPredicted RBP27.34■■□□□ 1.97
TMEM260-207ENST00000555497 PDGFDQ9GZP0 370 aaPredicted RBP27.34■■□□□ 1.97
TMEM260-207ENST00000555497 PMS1P54277 932 aaKnown RBP27.33■■□□□ 1.97
TMEM260-207ENST00000555497 CALCRLQ16602 461 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 PPP1R18Q6NYC8 613 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 ZMYND15Q9H091 742 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 LIMA1Q9UHB6 759 aaKnown RBP27.33■■□□□ 1.97
TMEM260-207ENST00000555497 TRIM49BA6NDI0 452 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 RAD21O60216 631 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 RHOBTB3O94955 611 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 CCT6AP40227 531 aaKnown RBP27.33■■□□□ 1.97
TMEM260-207ENST00000555497 TNNI2P48788 182 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 CTAGE1Q96RT6 745 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 CUEDC2Q9H467 287 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 NYAP2Q9P242 653 aa27.33■■□□□ 1.97
TMEM260-207ENST00000555497 MYH7BA7E2Y1 1941 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 LRRC10BA6NIK2 292 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 NPM3O75607 178 aaKnown RBP27.32■■□□□ 1.96
TMEM260-207ENST00000555497 MYL1P05976 194 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 REXO1L1PQ8IX06 675 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 PRMT6Q96LA8 375 aaPredicted RBP27.32■■□□□ 1.96
TMEM260-207ENST00000555497 KANSL2Q9H9L4 492 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 ARHGAP6O43182 974 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 C21orf2O43822 256 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 JAG1P78504 1218 aa27.32■■□□□ 1.96
TMEM260-207ENST00000555497 GDF11O95390 407 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 RBL2Q08999 1139 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 IRF2BP1Q8IU81 584 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 KIF18AQ8NI77 898 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 TRIM9Q9C026 710 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 GRB10Q13322 594 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 SLFN13Q68D06 897 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 SYT10Q6XYQ8 523 aa27.31■■□□□ 1.96
TMEM260-207ENST00000555497 GIMAP8Q8ND71 665 aaPredicted RBP27.31■■□□□ 1.96
TMEM260-207ENST00000555497 KIF2AO00139 706 aaPredicted RBP27.3■■□□□ 1.96
TMEM260-207ENST00000555497 PPIP5K2O43314 1243 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 STX10O60499 249 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 FXR2P51116 673 aaKnown RBP eCLIP27.3■■□□□ 1.96
TMEM260-207ENST00000555497 QRICH1Q2TAL8 776 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 TCP11X2Q5H9J9 407 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 CUL5Q93034 780 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 MAGEF1Q9HAY2 307 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 STK32BQ9NY57 414 aa27.3■■□□□ 1.96
TMEM260-207ENST00000555497 KCNJ18B7U540 433 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 SLC1A4P43007 532 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 KCNJ12Q14500 433 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 FILIP1LQ4L180 1135 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 PPP4R3BQ5MIZ7 849 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 FCHSD1Q86WN1 690 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 PNMA5Q96PV4 448 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 C7orf25Q9BPX7 421 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 VPS16Q9H269 839 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 PSTPIP2Q9H939 334 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 TAB2Q9NYJ8 693 aa27.29■■□□□ 1.96
TMEM260-207ENST00000555497 RGS17Q9UGC6 210 aaPredicted RBP27.29■■□□□ 1.96
TMEM260-207ENST00000555497 AKR1B15C9JRZ8 316 aaPredicted RBP27.29■■□□□ 1.96
TMEM260-207ENST00000555497 COPB1P53618 953 aaKnown RBP27.29■■□□□ 1.96
TMEM260-207ENST00000555497 RRP1BQ14684 758 aaKnown RBP27.29■■□□□ 1.96
TMEM260-207ENST00000555497 NAA30Q147X3 362 aaPredicted RBP27.29■■□□□ 1.96
TMEM260-207ENST00000555497 CPLX3Q8WVH0 158 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms