RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 MUM1L1Q5H9M0 696 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 DHX32Q7L7V1 743 aaKnown RBP14.07□□□□□ -0.16
SRP54-206ENST00000555317 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
SRP54-206ENST00000555317 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 RASEFQ8IZ41 740 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 STAG2Q8N3U4 1231 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 MPHOSPH6Q99547 160 aaKnown RBP14.07□□□□□ -0.16
SRP54-206ENST00000555317 LRRC2Q9BYS8 371 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 DDX20Q9UHI6 824 aaKnown RBP14.07□□□□□ -0.16
SRP54-206ENST00000555317 ABCB11O95342 1321 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 DNAJC25-GNG10A0A024R161 153 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 PALM3A6NDB9 673 aaPredicted RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 ASB14A6NK59 587 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 EPB41L2O43491 1005 aaKnown RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 PSMA5P28066 241 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 GNAQP50148 359 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 TROAPQ12815 778 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 RNF207Q6ZRF8 634 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 HOMER1Q86YM7 354 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 JAKMIP1Q96N16 626 aaKnown RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 LZTS2Q9BRK4 669 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 HTATIP2Q9BUP3 242 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 AMNQ9BXJ7 453 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 JMJD4Q9H9V9 463 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 CYP39A1Q9NYL5 469 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 ZHX1Q9UKY1 873 aaPredicted RBP14.06□□□□□ -0.16
SRP54-206ENST00000555317 FRMPD3Q5JV73 1810 aa14.06□□□□□ -0.16
SRP54-206ENST00000555317 NFIBO00712 420 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 ZBTB5O15062 677 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 SEPT4O43236 478 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 CALML3P27482 149 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 CNTN2Q02246 1040 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 BAATQ14032 418 aaPredicted RBP14.05□□□□□ -0.16
SRP54-206ENST00000555317 ADCK5Q3MIX3 580 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 PRAMEF19Q5SWL8 479 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 NECAB2Q7Z6G3 386 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 FAM133AQ8N9E0 248 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 TRPV1Q8NER1 839 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
SRP54-206ENST00000555317 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
SRP54-206ENST00000555317 OGDHLQ9ULD0 1010 aa14.05□□□□□ -0.16
SRP54-206ENST00000555317 NAP1L2Q9ULW6 460 aaPredicted RBP14.05□□□□□ -0.16
SRP54-206ENST00000555317 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
SRP54-206ENST00000555317 B4DLN1 442 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
SRP54-206ENST00000555317 RARBP10826 455 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 AKR1A1P14550 325 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 CASTP20810 708 aaKnown RBP14.04□□□□□ -0.16
SRP54-206ENST00000555317 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
SRP54-206ENST00000555317 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 SGMS1Q86VZ5 419 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 CCDC144CPQ8IYA2 1237 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 TCEANC2Q96MN5 208 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 ABHD16BQ9H3Z7 469 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.04□□□□□ -0.16
SRP54-206ENST00000555317 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
SRP54-206ENST00000555317 IGHA2P01877 340 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 SLC30A10Q6XR72 485 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 RAB11FIP4Q86YS3 637 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 PIBF1Q8WXW3 757 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 DPF3Q92784 378 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 KCNB2Q92953 911 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
SRP54-206ENST00000555317 PAWRQ96IZ0 340 aaKnown RBP14.03□□□□□ -0.16
SRP54-206ENST00000555317 PIGSQ96S52 555 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 FAM184BQ9ULE4 1060 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
SRP54-206ENST00000555317 PNMA6FA0A0J9YX94 578 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 KBTBD13C9JR72 458 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 ZBTB43O43298 467 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 RXRAP19793 462 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 RPS6P62753 249 aaKnown RBP14.02□□□□□ -0.17
SRP54-206ENST00000555317 EXOSC10Q01780 885 aaKnown RBP14.02□□□□□ -0.17
SRP54-206ENST00000555317 ACVR2BQ13705 512 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 ANO1Q5XXA6 986 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 LHX8Q68G74 356 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 NOL8Q76FK4 1167 aaKnown RBP14.02□□□□□ -0.17
SRP54-206ENST00000555317 FANCBQ8NB91 859 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 USP26Q9BXU7 913 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 MAF1Q9H063 256 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 C11orf49Q9H6J7 331 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 RBM28Q9NW13 759 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms