RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MAST2Q6P0Q8 1798 aa17.58■□□□□ 0.41
ARHGEF40-203ENST00000554514 LGALS16A8MUM7 142 aa17.58■□□□□ 0.41
ARHGEF40-203ENST00000554514 PPP4CP60510 307 aa17.58■□□□□ 0.41
ARHGEF40-203ENST00000554514 VPS72Q15906 364 aa17.58■□□□□ 0.41
ARHGEF40-203ENST00000554514 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.41
ARHGEF40-203ENST00000554514 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 NKRFO15226 690 aaKnown RBP eCLIP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 NDUFA10O95299 355 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 TRIM21P19474 475 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 MTIF2P46199 727 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 TRIM14Q14142 442 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 NCAPH2Q6IBW4 605 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 DAGLBQ8NCG7 672 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 OR8K1Q8NGG5 319 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 TUBGCP2Q9BSJ2 902 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 CCSER1Q9C0I3 900 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 AGPAT5Q9NUQ2 364 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 RHOBTB3O94955 611 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 ANKRD40Q6AI12 368 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 CEP112Q8N8E3 955 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 REXO2Q9Y3B8 237 aaKnown RBP17.58■□□□□ 0.4
ARHGEF40-203ENST00000554514 GOLGB1Q14789 3259 aaKnown RBP17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 OAS2P29728 719 aaKnown RBP17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 TTI2Q6NXR4 508 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 C16orf86Q6ZW13 317 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 DYMQ7RTS9 669 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 PNKPQ96T60 521 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 GPCPD1Q9NPB8 672 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 HDAC6Q9UBN7 1215 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 GYS2P54840 703 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 KCNB1Q14721 858 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 LONRF2Q1L5Z9 754 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 GALNT17Q6IS24 598 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 CNOT6LQ96LI5 555 aaKnown RBP17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 DUSP9Q99956 384 aaKnown RBP17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 TRIM9Q9C026 710 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 ANKZF1Q9H8Y5 726 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
ARHGEF40-203ENST00000554514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 RAD21O60216 631 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 GNA11P29992 359 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 TBC1D8BQ0IIM8 1120 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 MCM6Q14566 821 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 REXO1Q8N1G1 1221 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 EP400Q96L91 3159 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 EEF1GP26641 437 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 P2RX5Q93086 422 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 LZTS2Q9BRK4 669 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 THAP9Q9H5L6 903 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 USP21Q9UK80 565 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 NAV1Q8NEY1 1877 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 BTAF1O14981 1849 aa17.56■□□□□ 0.4
ARHGEF40-203ENST00000554514 FECHP22830 423 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 KIAA1328Q86T90 577 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 GJA10Q969M2 543 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 LAD1O00515 517 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 CCDC122Q5T0U0 273 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 CAPZA3Q96KX2 299 aa17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 NOC4LQ9BVI4 516 aaKnown RBP17.55■□□□□ 0.4
ARHGEF40-203ENST00000554514 GPR75-ASB3A0A0A6YYF3 556 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 SRGAP2O75044 1071 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 GTF2IP78347 998 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 WDR59Q6PJI9 974 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CTAGE6Q86UF2 777 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CALML4Q96GE6 196 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 FUT8Q9BYC5 575 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 POTEMA6NI47 508 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 TDP2O95551 362 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 IDEP14735 1019 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 PRPHP41219 470 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 NOA1Q8NC60 698 aaKnown RBP17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 MYO6Q9UM54 1294 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 RGL2O15211 777 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 TNNI2P48788 182 aa17.54■□□□□ 0.4
ARHGEF40-203ENST00000554514 DNM2P50570 870 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms