RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 TAF7LQ5H9L4 462 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 EXOSC6Q5RKV6 272 aaKnown RBP8.27□□□□□ -1.09
KTN1-213ENST00000554306 CEP85Q6P2H3 762 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 SYNE4Q8N205 404 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 ANKRD44Q8N8A2 993 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 C12orf50Q8NA57 414 aaPredicted RBP8.27□□□□□ -1.09
KTN1-213ENST00000554306 PSMG3-AS1Q96PY0 264 aa8.27□□□□□ -1.09
KTN1-213ENST00000554306 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
KTN1-213ENST00000554306 CLEC4MQ9H2X3 399 aaPredicted RBP8.27□□□□□ -1.09
KTN1-213ENST00000554306 BICC1Q9H694 974 aaKnown RBP8.27□□□□□ -1.09
KTN1-213ENST00000554306 NRXN2Q9P2S2 1712 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 CTSWP56202 376 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 FOXO4P98177 505 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 PCDH1Q08174 1060 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 CCDC57Q2TAC2 916 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 PRR5LQ6MZQ0 368 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 LMBR1LQ6UX01 489 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 FAM129BQ96TA1 746 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
KTN1-213ENST00000554306 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 KIAA1324LA8MWY0 1029 aaPredicted RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 CPNE3O75131 537 aaKnown RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 TIAF1O95411 115 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 CSF1RP07333 972 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 MAP4P27816 1152 aaKnown RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 PDE6BP35913 854 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 IFIT5Q13325 482 aaKnown RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 MTX1Q13505 466 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 HDAC1Q13547 482 aaPredicted RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 RABL6Q3YEC7 729 aaPredicted RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 EPHA10Q5JZY3 1008 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 HP1BP3Q5SSJ5 553 aaPredicted RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 KIAA0319Q5VV43 1072 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 RPGRQ92834 1020 aaKnown RBP8.25□□□□□ -1.09
KTN1-213ENST00000554306 KAZALD1Q96I82 304 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 TCF12Q99081 682 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 BRIP1Q9BX63 1249 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 ZFYVE1Q9HBF4 777 aa8.25□□□□□ -1.09
KTN1-213ENST00000554306 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 ANKRD31Q8N7Z5 1873 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 PNMA6EA0A0J9YXQ4 647 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 SURF6O75683 361 aaKnown RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 CYP11A1P05108 521 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 GRIA4P48058 902 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 G3BP1Q13283 466 aaKnown RBP eCLIP8.24□□□□□ -1.09
KTN1-213ENST00000554306 OS9Q13438 667 aaPredicted RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 SF3B3Q15393 1217 aaKnown RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 HSP90AB4PQ58FF6 505 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 DDX46Q7L014 1031 aaKnown RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 GIMAP7Q8NHV1 300 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 RBM17Q96I25 401 aaKnown RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 CDC5LQ99459 802 aaKnown RBP8.24□□□□□ -1.09
KTN1-213ENST00000554306 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 EHD4Q9H223 541 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 GREM2Q9H772 168 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 SPON1Q9HCB6 807 aa8.24□□□□□ -1.09
KTN1-213ENST00000554306 ABCC12Q96J65 1359 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 PRR19A6NJB7 356 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 H0YIN7 160 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 DLGAP3O95886 979 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
KTN1-213ENST00000554306 SGO2Q562F6 1265 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 CENPQQ7L2Z9 268 aaPredicted RBP8.23□□□□□ -1.09
KTN1-213ENST00000554306 SIRT2Q8IXJ6 389 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 SHKBP1Q8TBC3 707 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 MPHOSPH8Q99549 860 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 NRSN2Q9GZP1 204 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 TNRC6CQ9HCJ0 1690 aaKnown RBP8.23□□□□□ -1.09
KTN1-213ENST00000554306 TAF1P21675 1872 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 CACNA1SQ13698 1873 aa8.23□□□□□ -1.09
KTN1-213ENST00000554306 RTL9Q8NET4 1388 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 RAB11FIP3O75154 756 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 IGHDP01880 384 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 NPR1P16066 1061 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 ALDH1B1P30837 517 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 ORC1Q13415 861 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 SPRED3Q2MJR0 410 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 C2CD5Q86YS7 1000 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 ERC1Q8IUD2 1116 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 ANKRD18AQ8IVF6 992 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 DMRTB1Q96MA1 342 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 YIPF2Q9BWQ6 316 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 TMX4Q9H1E5 349 aaPredicted RBP8.22□□□□□ -1.09
KTN1-213ENST00000554306 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 CNNM1Q9NRU3 951 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 KIF13BQ9NQT8 1826 aa8.22□□□□□ -1.09
KTN1-213ENST00000554306 MED26O95402 600 aa8.21□□□□□ -1.1
KTN1-213ENST00000554306 ITPKAP23677 461 aa8.21□□□□□ -1.1
KTN1-213ENST00000554306 USP11P51784 963 aa8.21□□□□□ -1.1
KTN1-213ENST00000554306 RPS8P62241 208 aaKnown RBP8.21□□□□□ -1.1
KTN1-213ENST00000554306 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
KTN1-213ENST00000554306 SOX4Q06945 474 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms