RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 SULT6B1Q6IMI4 303 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 PDZD3Q86UT5 571 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ARMC10Q8N2F6 343 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ZNF622Q969S3 477 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 TP53INP1Q96A56 240 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 WDR89Q96FK6 387 aaPredicted RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 API5Q9BZZ5 524 aaKnown RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ZC3H12CQ9C0D7 883 aaKnown RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 RNF208Q9H0X6 261 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ZFYVE1Q9HBF4 777 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 GPN3Q9UHW5 284 aaPredicted RBP7.16□□□□□ -1.26
VPS33B-203ENST00000554264 ZBTB1Q9Y2K1 713 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 PASKQ96RG2 1323 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 CARMIL3Q8ND23 1372 aa7.16□□□□□ -1.26
VPS33B-203ENST00000554264 PCNTO95613 3336 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 K7ELQ4 463 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 CDC45O75419 566 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 DDNO94850 711 aaPredicted RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 STARD3NLO95772 234 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 CYP11A1P05108 521 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 HSP90AA1P07900 732 aaKnown RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 DRD2P14416 443 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 BMP6P22004 513 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 MCM5P33992 734 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 EXOSC9Q06265 439 aaKnown RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 PSMD2Q13200 908 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 KLHL40Q2TBA0 621 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 MEI1Q5TIA1 1274 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 MTERF4Q7Z6M4 381 aaKnown RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 SSH1Q8WYL5 1049 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 FAM46AQ96IP4 442 aaKnown RBP7.15□□□□□ -1.26
VPS33B-203ENST00000554264 MAP7D2Q96T17 732 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 IFT57Q9NWB7 429 aa7.15□□□□□ -1.26
VPS33B-203ENST00000554264 MRC1P22897 1456 aa7.15□□□□□ -1.27
VPS33B-203ENST00000554264 NPHP1O15259 732 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 RNMTO43148 476 aaKnown RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 TIAF1O95411 115 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 CELA3AP09093 270 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 PREPP48147 710 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 LBX1P52954 281 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 EIF5P55010 431 aaKnown RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 AFDNP55196 1824 aaKnown RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 FGD1P98174 961 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 SLC39A6Q13433 755 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 SULF2Q8IWU5 870 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 SMG8Q8ND04 991 aaKnown RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 ABHD8Q96I13 439 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 PPP1R9BQ96SB3 815 aa7.14□□□□□ -1.27
VPS33B-203ENST00000554264 TAF1DQ9H5J8 278 aaPredicted RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 CCDC86Q9H6F5 360 aaKnown RBP7.14□□□□□ -1.27
VPS33B-203ENST00000554264 ABCC4O15439 1325 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 RASSF10A6NK89 507 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 EPB41L2O43491 1005 aaKnown RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF862O60290 1169 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 HSPA8P11142 646 aaKnown RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 LIG1P18858 919 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 ARNTP27540 789 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 IL13P35225 146 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 MCM2P49736 904 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 RIPK4P57078 832 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 ST5P78524 1137 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 MAP2K1Q02750 393 aaPredicted RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 AP3B2Q13367 1082 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 TBC1D9BQ66K14 1250 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 PNMA8AQ86V59 439 aaPredicted RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 TTC5Q8N0Z6 440 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 CNBD1Q8NA66 436 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 MASTLQ96GX5 879 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 CORO1BQ9BR76 489 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 TEX13AQ9BXU3 409 aaPredicted RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 SUGCTQ9HAC7 445 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 PPM1HQ9ULR3 514 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 NOB1Q9ULX3 412 aaKnown RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 RRP7AQ9Y3A4 280 aaKnown RBP7.13□□□□□ -1.27
VPS33B-203ENST00000554264 SCN11AQ9UI33 1791 aa7.13□□□□□ -1.27
VPS33B-203ENST00000554264 CACNA1FO60840 1977 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 DICER1Q9UPY3 1922 aaKnown RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 GSTP1P09211 210 aaKnown RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 SRGNP10124 158 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 NME2P22392 152 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF445P59923 1031 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 NFE2L2Q16236 605 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 DEFB115Q30KQ5 88 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 CCDC93Q567U6 631 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 INTS3Q68E01 1043 aaKnown RBP7.12□□□□□ -1.27
VPS33B-203ENST00000554264 TMEM57Q8N5G2 664 aa7.12□□□□□ -1.27
VPS33B-203ENST00000554264 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms