RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 N4BP3O15049 544 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 NPHP1O15259 732 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 RHOBTB3O94955 611 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 NDUFA10O95299 355 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 NTSR2O95665 410 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 RPN1P04843 607 aaKnown RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 SRGNP10124 158 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 PRLRP16471 622 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 CYP7A1P22680 504 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 GPTP24298 496 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 HNRNPH3P31942 346 aaKnown RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 RFC5P40937 340 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 GNAQP50148 359 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 DNM2P50570 870 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 USP14P54578 494 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 STIM1Q13586 685 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 KCNJ12Q14500 433 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 CASP8Q14790 479 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 TUSC1Q2TAM9 212 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 TMEM259Q4ZIN3 620 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 HSP90B2PQ58FF3 399 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 SPECC1Q5M775 1068 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 ZNF569Q5MCW4 686 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 IFIT1BQ5T764 474 aaKnown RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 WWC2Q6AWC2 1192 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 CTR9Q6PD62 1173 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 LEKR1Q6ZMV7 388 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 FAM114A1Q8IWE2 563 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 GRAMD1CQ8IYS0 662 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 CCDC155Q8N6L0 562 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 ZNF507Q8TCN5 953 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 DDX17Q92841 729 aaKnown RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 SYTL4Q96C24 671 aaPredicted RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 DHTKD1Q96HY7 919 aaPredicted RBP5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 EPSTI1Q96J88 318 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 SLC4A9Q96Q91 983 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 PNKPQ96T60 521 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 TSGA10Q9BZW7 698 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 TTYH3Q9C0H2 523 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 LZTFL1Q9NQ48 299 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 DISC1Q9NRI5 854 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 ATP8A2Q9NTI2 1148 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 VPS54Q9P1Q0 977 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 LIMD1Q9UGP4 676 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 MYO6Q9UM54 1294 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 CAPN11Q9UMQ6 739 aa5.9□□□□□ -1.46
TMEM55B-204ENST00000553602 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 NRAPQ86VF7 1730 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CASZ1Q86V15 1759 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 BICDL2A1A5D9 508 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 ERICH4A6NGS2 130 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 A6NNZ2 444 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 EIF3CLB5ME19 914 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 M0R2N6 131 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 SPTLC1O15269 473 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 POLR3GO15318 223 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 PRKAB2O43741 272 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 KRT86O43790 486 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 SHOX2O60902 331 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CAMTA2O94983 1202 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 TNFRSF8P28908 595 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 KRT9P35527 623 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CYLC1P35663 651 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 GJA5P36382 358 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 VSNL1P62760 191 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 ST5P78524 1137 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 ZBED6P86452 979 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CHRNDQ07001 517 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 SF3B3Q15393 1217 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 TUBB8Q3ZCM7 444 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 EARS2Q5JPH6 523 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 RRP12Q5JTH9 1297 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 RRAGBQ5VZM2 374 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 TTI2Q6NXR4 508 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 RSBN1LQ6PCB5 846 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CLEC4GQ6UXB4 293 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CERS3Q8IU89 383 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 ZSCAN29Q8IWY8 852 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 SYNE4Q8N205 404 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 MB21D1Q8N884 522 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 C4orf32Q8N8J7 132 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 GIMAP8Q8ND71 665 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 NEK11Q8NG66 645 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 NELFBQ8WX92 580 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC85AQ96PX6 553 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 ERGIC2Q96RQ1 377 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 KCNK17Q96T54 332 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 NUP88Q99567 741 aaPredicted RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 EIF3CQ99613 913 aaKnown RBP5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 MTRQ99707 1265 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 LZTS2Q9BRK4 669 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 FAM107BQ9H098 131 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 CCDC87Q9NVE4 849 aa5.89□□□□□ -1.47
TMEM55B-204ENST00000553602 KBTBD4Q9NVX7 518 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms