RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TRIOO75962 3097 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 TLK2Q86UE8 772 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 CHST13Q8NET6 341 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 SLC9A7Q96T83 725 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 ALDH8A1Q9H2A2 487 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 SLC38A10Q9HBR0 1119 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 LMCD1Q9NZU5 365 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 FBXO40Q9UH90 709 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 Q9Y3F1 56 aa13.68□□□□□ -0.22
SUPT16H-202ENST00000552829 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 USP17L21D6R901 530 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 F5H6K3 240 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 NDUFB10O96000 172 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 SMPD1P17405 629 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 PTGS1P23219 599 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 PSMC6P62333 389 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 NHLH1Q02575 133 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 KLRC3Q07444 240 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 HERC6Q8IVU3 1022 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 RAVER2Q9HCJ3 691 aaKnown RBP13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 NYAP2Q9P242 653 aa13.67□□□□□ -0.22
SUPT16H-202ENST00000552829 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 ZBED4O75132 1171 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 OAZ1P54368 228 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 GJD3Q8N144 294 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 LCTP09848 1927 aa13.66□□□□□ -0.22
SUPT16H-202ENST00000552829 TANC1Q9C0D5 1861 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 ZEB2O60315 1214 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 MBD4O95243 580 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 CYP2C9P11712 490 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 RFC2P35250 354 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 LEXMQ3ZCV2 418 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 SLFNL1Q499Z3 407 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 TMEM63BQ5T3F8 832 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 TAPT1Q6NXT6 567 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 AACSQ86V21 672 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 TRMT13Q9NUP7 481 aaKnown RBP13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
SUPT16H-202ENST00000552829 MYH7P12883 1935 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 POTEB3A0JP26 581 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 ASB14A6NK59 587 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 ACTN1P12814 892 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 POTEBQ6S5H4 581 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 NOL8Q76FK4 1167 aaKnown RBP13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 A1CFQ9NQ94 594 aaKnown RBP13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 TNKSO95271 1327 aa13.64□□□□□ -0.23
SUPT16H-202ENST00000552829 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 KIF28PB7ZC32 967 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 GOLIM4O00461 696 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 RAD21O60216 631 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 RASA1P20936 1047 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 ADD2P35612 726 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 MKL1Q969V6 931 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 FEM1BQ9UK73 627 aa13.63□□□□□ -0.23
SUPT16H-202ENST00000552829 SIP14410 1827 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 ALADP13716 330 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 ACAD9Q9H845 621 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 ZNF536O15090 1300 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 MYO7AQ13402 2215 aa13.62□□□□□ -0.23
SUPT16H-202ENST00000552829 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 FDX1P10109 184 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 PURAQ00577 322 aaKnown RBP13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 GPNMBQ14956 572 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms