RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 FRMPD2Q68DX3 1309 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 TIMP1P01033 207 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 CDK7P50613 346 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 HAND2P61296 217 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 SMAD3P84022 425 aaKnown RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 C16orf59Q7L2K0 433 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 ZNF589Q86UQ0 364 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 FBXO16Q8IX29 292 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 SPC25Q9HBM1 224 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
LINC00661-207ENST00000552685 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 CCPG1Q9ULG6 757 aa11.72□□□□□ -0.53
LINC00661-207ENST00000552685 ELP1O95163 1332 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 A0A0U1RQG5 324 aaPredicted RBP11.71□□□□□ -0.53
LINC00661-207ENST00000552685 ARVCFO00192 962 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 ORC4O43929 436 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 FGAP02671 866 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 FDX1P10109 184 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 ACRP10323 421 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 SMPD1P17405 629 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00661-207ENST00000552685 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 HELLSQ9NRZ9 838 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
LINC00661-207ENST00000552685 ASB14A6NK59 587 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 GRXCR1A8MXD5 290 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 NFIBO00712 420 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
LINC00661-207ENST00000552685 PLA2G6O60733 806 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 CSF2RAP15509 400 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 CYP2C18P33260 490 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 NOVP48745 357 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 PSMC6P62333 389 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 ALX1Q15699 326 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 TKFCQ3LXA3 575 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 TAPT1Q6NXT6 567 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 DCAF4Q8WV16 495 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
LINC00661-207ENST00000552685 GNEQ9Y223 722 aaKnown RBP11.7□□□□□ -0.54
LINC00661-207ENST00000552685 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 ICAM1P05362 532 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 FGRP09769 529 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 HSPD1P10809 573 aaKnown RBP11.69□□□□□ -0.54
LINC00661-207ENST00000552685 FOSL2P15408 326 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 PBX2P40425 430 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
LINC00661-207ENST00000552685 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
LINC00661-207ENST00000552685 GRIN2CQ14957 1233 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 FSCN1Q16658 493 aaKnown RBP11.69□□□□□ -0.54
LINC00661-207ENST00000552685 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 TMEM240Q5SV17 173 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 SYDE2Q5VT97 1194 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 SLC30A10Q6XR72 485 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 PPP1R13LQ8WUF5 828 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 AP5M1Q9H0R1 490 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 RANBP17Q9H2T7 1088 aaKnown RBP11.69□□□□□ -0.54
LINC00661-207ENST00000552685 MYO9BQ13459 2157 aa11.69□□□□□ -0.54
LINC00661-207ENST00000552685 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 TLR3O15455 904 aaKnown RBP11.68□□□□□ -0.54
LINC00661-207ENST00000552685 CD4P01730 458 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
LINC00661-207ENST00000552685 DNAJB2P25686 324 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 PPIGQ13427 754 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00661-207ENST00000552685 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 KIAA1211Q6ZU35 1233 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
LINC00661-207ENST00000552685 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 XIRP2A4UGR9 3374 aa11.68□□□□□ -0.54
LINC00661-207ENST00000552685 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
LINC00661-207ENST00000552685 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
LINC00661-207ENST00000552685 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
LINC00661-207ENST00000552685 PDHBP11177 359 aa11.67□□□□□ -0.54
LINC00661-207ENST00000552685 CALML3P27482 149 aa11.67□□□□□ -0.54
LINC00661-207ENST00000552685 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms