RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TXLNBQ8N3L3 684 aa14.61□□□□□ -0.07
CACNB3-219ENST00000551544 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-219ENST00000551544 TUBGCP2Q9BSJ2 902 aa14.61□□□□□ -0.07
CACNB3-219ENST00000551544 EXOC1Q9NV70 894 aa14.61□□□□□ -0.07
CACNB3-219ENST00000551544 MYO1AQ9UBC5 1043 aa14.61□□□□□ -0.07
CACNB3-219ENST00000551544 MYO6Q9UM54 1294 aa14.61□□□□□ -0.07
CACNB3-219ENST00000551544 ROBO3Q96MS0 1386 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 A0A1W2PQC6 194 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 MYL1P05976 194 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 LDHCP07864 332 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 TRIM21P19474 475 aaKnown RBP14.6□□□□□ -0.07
CACNB3-219ENST00000551544 BTDP43251 543 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 CDK8P49336 464 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 KLK7P49862 253 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 GYS2P54840 703 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 ST5P78524 1137 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 WHAMMP3Q1A5X7 153 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 WDR59Q6PJI9 974 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 ZNF804AQ7Z570 1209 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 DUSP9Q99956 384 aaKnown RBP14.6□□□□□ -0.07
CACNB3-219ENST00000551544 ZMYND12Q9H0C1 365 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 CAPN11Q9UMQ6 739 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 FLT1P17948 1338 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 RGL2O15211 777 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 FCER1AP12319 257 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 PRPHP41219 470 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 DNM2P50570 870 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 PPP4CP60510 307 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 STK4Q13043 487 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 GRAPQ13588 217 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 KRT25Q7Z3Z0 450 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
CACNB3-219ENST00000551544 DNAJC7Q99615 494 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 SUGCTQ9HAC7 445 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 ABCB6Q9NP58 842 aa14.6□□□□□ -0.07
CACNB3-219ENST00000551544 TBC1D8BQ0IIM8 1120 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 MUM1L1Q5H9M0 696 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 BEND6Q5SZJ8 279 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 CCDC122Q5T0U0 273 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 ANKRD40Q6AI12 368 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 NOA1Q8NC60 698 aaKnown RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 MSANTD4Q8NCY6 345 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 P2RX5Q93086 422 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 HPS3Q969F9 1004 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 CCDC47Q96A33 483 aaKnown RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 DHTKD1Q96HY7 919 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 LZTS2Q9BRK4 669 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 TRIM9Q9C026 710 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 HDAC6Q9UBN7 1215 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 MAST2Q6P0Q8 1798 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 MTIF2P46199 727 aaKnown RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 HERVK_113P62684 666 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 KIAA1328Q86T90 577 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 TEX11Q8IYF3 940 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 NEK11Q8NG66 645 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 RRP36Q96EU6 259 aaKnown RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 UBA5Q9GZZ9 404 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 ZNF287Q9HBT7 754 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
CACNB3-219ENST00000551544 RAB21Q9UL25 225 aa14.59□□□□□ -0.07
CACNB3-219ENST00000551544 H3BQF6 201 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 ERLIN1O75477 346 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 SRGNP10124 158 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 CAPN2P17655 700 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 RFC4P35249 363 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 VSNL1P62760 191 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 AMPD2Q01433 879 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 NEK8Q86SG6 692 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 TBCKQ8TEA7 893 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 CNOT6LQ96LI5 555 aaKnown RBP14.58□□□□□ -0.08
CACNB3-219ENST00000551544 AK8Q96MA6 479 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 PIGSQ96S52 555 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 SPZ1Q9BXG8 430 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 HAUS4Q9H6D7 363 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-219ENST00000551544 CCNE1P24864 410 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 GNA11P29992 359 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 NT5C2P49902 561 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 NOC3LQ8WTT2 800 aaKnown RBP14.58□□□□□ -0.08
CACNB3-219ENST00000551544 HNRNPLLQ8WVV9 542 aaKnown RBP14.58□□□□□ -0.08
CACNB3-219ENST00000551544 C8orf37Q96NL8 207 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 CUEDC2Q9H467 287 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 PDE11AQ9HCR9 933 aa14.58□□□□□ -0.08
CACNB3-219ENST00000551544 BICDL2A1A5D9 508 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 MAP2K7O14733 419 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 TXKP42681 527 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 HDXQ7Z353 690 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 CEP95Q96GE4 821 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 NOC4LQ9BVI4 516 aaKnown RBP14.57□□□□□ -0.08
CACNB3-219ENST00000551544 ZNHIT6Q9NWK9 470 aaKnown RBP14.57□□□□□ -0.08
CACNB3-219ENST00000551544 TMEM260Q9NX78 707 aa14.57□□□□□ -0.08
CACNB3-219ENST00000551544 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms