RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 CAPNS1P04632 268 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
SCAF11-215ENST00000551391 PCBP3P57721 371 aaKnown RBP5.3□□□□□ -1.56
SCAF11-215ENST00000551391 POU4F1Q01851 419 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 TMEM132EQ6IEE7 984 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 LILRA2Q8N149 483 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 MRGPRX3Q96LB0 322 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 SLC6A17Q9H1V8 727 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 NOL6Q9H6R4 1146 aaKnown RBP5.3□□□□□ -1.56
SCAF11-215ENST00000551391 CGGBP1Q9UFW8 167 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-215ENST00000551391 AKT3Q9Y243 479 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 SUGT1Q9Y2Z0 365 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 ZNF205O95201 554 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 VAV1P15498 845 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 HOXA5P20719 270 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-215ENST00000551391 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
SCAF11-215ENST00000551391 IFRD2Q12894 506 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-215ENST00000551391 SV2CQ496J9 727 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 MTERF2Q49AM1 385 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 CWF19L1Q69YN2 538 aaKnown RBP5.29□□□□□ -1.56
SCAF11-215ENST00000551391 NOP9Q86U38 636 aaKnown RBP5.29□□□□□ -1.56
SCAF11-215ENST00000551391 TRIM59Q8IWR1 403 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 JMYQ8N9B5 988 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 PDZD8Q8NEN9 1154 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 ADCY4Q8NFM4 1077 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 RELTQ969Z4 430 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 RNF32Q9H0A6 362 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 ZCCHC4Q9H5U6 513 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 ZMYM5Q9UJ78 669 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 TCFL5Q9UL49 500 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 MINPP1Q9UNW1 487 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 PCDHA11Q9Y5I1 949 aa5.29□□□□□ -1.56
SCAF11-215ENST00000551391 A0A1W2PQU0 124 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 CCDC85CA6NKD9 419 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 H0Y8X5 98 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 ITGAVP06756 1048 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 LTKP29376 864 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 TEKQ02763 1124 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 EGR3Q06889 387 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 BMS1Q14692 1282 aaKnown RBP5.28□□□□□ -1.56
SCAF11-215ENST00000551391 LONRF2Q1L5Z9 754 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 ZNF227Q86WZ6 799 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 IRF2BP1Q8IU81 584 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 LRRC47Q8N1G4 583 aaKnown RBP5.28□□□□□ -1.56
SCAF11-215ENST00000551391 MRFAP1L1Q96HT8 127 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 CWC22Q9HCG8 908 aaKnown RBP5.28□□□□□ -1.56
SCAF11-215ENST00000551391 PARD6AQ9NPB6 346 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 LRP2BPQ9P2M1 347 aa5.28□□□□□ -1.56
SCAF11-215ENST00000551391 SSU72P8A0A1W2PR75 194 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 FITM1A5D6W6 292 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 SYPP08247 313 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 BMP7P18075 431 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 PDE6BP35913 854 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 DLG4P78352 724 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 AMPD2Q01433 879 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 PPP2R5DQ14738 602 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 CRTC3Q6UUV7 619 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 SPATC1Q76KD6 591 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 ZNF605Q86T29 641 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 SPPL2CQ8IUH8 684 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 ZDHHC15Q96MV8 337 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 DNAJC7Q99615 494 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 SPATA9Q9BWV2 254 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 SLC12A9Q9BXP2 914 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 FOXP3Q9BZS1 431 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 PIF1Q9H611 641 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 C19orf44Q9H6X5 657 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 CYP26B1Q9NR63 512 aa5.27□□□□□ -1.57
SCAF11-215ENST00000551391 CNOT6Q9ULM6 557 aaKnown RBP5.27□□□□□ -1.57
SCAF11-215ENST00000551391 TMEM82A0PJX8 343 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 MEIS1O00470 390 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 AURKAO14965 403 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 PEX10O60683 326 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 SEMA7AO75326 666 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 KCNH1O95259 989 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 HOXC12P31275 282 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 PPP2R2AP63151 447 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 SSRP1Q08945 709 aaKnown RBP5.26□□□□□ -1.57
SCAF11-215ENST00000551391 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-215ENST00000551391 ZNF385BQ569K4 471 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 ZC3H12BQ5HYM0 836 aaKnown RBP5.26□□□□□ -1.57
SCAF11-215ENST00000551391 RTP2Q5QGT7 225 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 GTF2IRD2BQ6EKJ0 949 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 GTF2IRD2Q86UP8 949 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 ZBTB38Q8NAP3 1195 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-215ENST00000551391 FCRL3Q96P31 734 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-215ENST00000551391 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 MCOLN1Q9GZU1 580 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 NKX2-4Q9H2Z4 354 aa5.26□□□□□ -1.57
SCAF11-215ENST00000551391 RFXAPO00287 272 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 ADCY3O60266 1144 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 DIAPH1O60610 1272 aaKnown RBP5.25□□□□□ -1.57
SCAF11-215ENST00000551391 VAMP4O75379 141 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 SCG5P05408 212 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 ZGLP1P0C6A0 271 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 FGFR1P11362 822 aa5.25□□□□□ -1.57
SCAF11-215ENST00000551391 TCERG1LQ5VWI1 586 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms