RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 MCM3APO60318 1980 aa24.42■■□□□ 1.5
CACNB3-218ENST00000550771 TLR3O15455 904 aaKnown RBP24.41■■□□□ 1.5
CACNB3-218ENST00000550771 CABYRO75952 493 aa24.41■■□□□ 1.5
CACNB3-218ENST00000550771 ICAM1P05362 532 aa24.41■■□□□ 1.5
CACNB3-218ENST00000550771 HDAC1Q13547 482 aaPredicted RBP24.41■■□□□ 1.5
CACNB3-218ENST00000550771 MUM1L1Q5H9M0 696 aa24.41■■□□□ 1.5
CACNB3-218ENST00000550771 MYLIPQ8WY64 445 aa24.41■■□□□ 1.5
CACNB3-218ENST00000550771 RANBP17Q9H2T7 1088 aaKnown RBP24.41■■□□□ 1.5
CACNB3-218ENST00000550771 CCPG1Q9ULG6 757 aa24.41■■□□□ 1.5
CACNB3-218ENST00000550771 ASTN1O14525 1302 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 SNAP25P60880 206 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 CCDC96Q2M329 555 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 IQSEC1Q6DN90 963 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 BTNL9Q6UXG8 535 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 RASGRP2Q7LDG7 609 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 TLK2Q86UE8 772 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 TMEM199Q8N511 208 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 SLC43A3Q8NBI5 491 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.4■■□□□ 1.5
CACNB3-218ENST00000550771 COL25A1Q9BXS0 654 aaPredicted RBP24.4■■□□□ 1.5
CACNB3-218ENST00000550771 TCP11L1Q9NUJ3 509 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 Q9Y3F1 56 aa24.4■■□□□ 1.5
CACNB3-218ENST00000550771 CD4P01730 458 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 FGAP02671 866 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 TOP1P11387 765 aaKnown RBP24.39■■□□□ 1.49
CACNB3-218ENST00000550771 BEX3Q00994 111 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 FSCN1Q16658 493 aaKnown RBP24.39■■□□□ 1.49
CACNB3-218ENST00000550771 MORC4Q8TE76 937 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 SEZ6LQ9BYH1 1024 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 AP5M1Q9H0R1 490 aa24.39■■□□□ 1.49
CACNB3-218ENST00000550771 ZMYM6O95789 1325 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 ZEB2O60315 1214 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 FOSL2P15408 326 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 SMPD1P17405 629 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 DNAJB2P25686 324 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 TMEM240Q5SV17 173 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 TAPT1Q6NXT6 567 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 CXCL17Q6UXB2 119 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 C16orf59Q7L2K0 433 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 FAM227BQ96M60 508 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 VTA1Q9NP79 307 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 MTMR7Q9Y216 660 aa24.38■■□□□ 1.49
CACNB3-218ENST00000550771 UNC80Q8N2C7 3258 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 CDH23Q9H251 3354 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 A0A0D9SFI3 127 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 CSF2RAP15509 400 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 RASIP1Q5U651 963 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 SYDE2Q5VT97 1194 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 TTBK2Q6IQ55 1244 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 NSMFQ6X4W1 530 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 TMEM47Q9BQJ4 181 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 TOMM22Q9NS69 142 aa24.37■■□□□ 1.49
CACNB3-218ENST00000550771 LOC102724159A0A0B4J2E5 919 aa24.36■■□□□ 1.49
CACNB3-218ENST00000550771 DYNC1LI2O43237 492 aaPredicted RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 HSPD1P10809 573 aaKnown RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PWP2Q15269 919 aaKnown RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 RRP12Q5JTH9 1297 aaKnown RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PSRC1Q6PGN9 363 aaPredicted RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 FBXO16Q8IX29 292 aaPredicted RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PPP1R12CQ9BZL4 782 aa24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PDGFCQ9NRA1 345 aa24.36■■□□□ 1.49
CACNB3-218ENST00000550771 ADD3Q9UEY8 706 aaKnown RBP24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PNMA2Q9UL42 364 aa24.36■■□□□ 1.49
CACNB3-218ENST00000550771 CUL9Q8IWT3 2517 aa24.36■■□□□ 1.49
CACNB3-218ENST00000550771 PCP11498 1178 aaKnown RBP24.35■■□□□ 1.49
CACNB3-218ENST00000550771 SLC16A2P36021 539 aa24.35■■□□□ 1.49
CACNB3-218ENST00000550771 ITGA7Q13683 1181 aa24.35■■□□□ 1.49
CACNB3-218ENST00000550771 EEPD1Q7L9B9 569 aa24.35■■□□□ 1.49
CACNB3-218ENST00000550771 TIFAQ96CG3 184 aa24.35■■□□□ 1.49
CACNB3-218ENST00000550771 DDX49Q9Y6V7 483 aaKnown RBP24.35■■□□□ 1.49
CACNB3-218ENST00000550771 BAATQ14032 418 aaPredicted RBP24.34■■□□□ 1.49
CACNB3-218ENST00000550771 GRIN2CQ14957 1233 aa24.34■■□□□ 1.49
CACNB3-218ENST00000550771 KIAA1211Q6ZU35 1233 aa24.34■■□□□ 1.49
CACNB3-218ENST00000550771 TTC14Q96N46 770 aa24.34■■□□□ 1.49
CACNB3-218ENST00000550771 PURBQ96QR8 312 aaKnown RBP24.34■■□□□ 1.49
CACNB3-218ENST00000550771 ZNF576Q9H609 170 aa24.34■■□□□ 1.49
CACNB3-218ENST00000550771 GRIN2DO15399 1336 aa24.34■■□□□ 1.49
CACNB3-218ENST00000550771 PDHBP11177 359 aa24.33■■□□□ 1.49
CACNB3-218ENST00000550771 DUSP28Q4G0W2 176 aa24.33■■□□□ 1.49
CACNB3-218ENST00000550771 ZNF365Q70YC5 407 aa24.33■■□□□ 1.49
CACNB3-218ENST00000550771 ZNF589Q86UQ0 364 aaPredicted RBP24.33■■□□□ 1.49
CACNB3-218ENST00000550771 HIPK3Q9H422 1215 aa24.33■■□□□ 1.49
CACNB3-218ENST00000550771 IL23AQ9NPF7 189 aa24.33■■□□□ 1.49
CACNB3-218ENST00000550771 FRMPD2Q68DX3 1309 aaPredicted RBP24.33■■□□□ 1.48
CACNB3-218ENST00000550771 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.48
CACNB3-218ENST00000550771 LRRC37A2A6NM11 1700 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 NFIBO00712 420 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 ACRP10323 421 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 PTGS1P23219 599 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 CYP2C18P33260 490 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 ALDH5A1P51649 535 aaPredicted RBP24.32■■□□□ 1.48
CACNB3-218ENST00000550771 NMIQ13287 307 aaPredicted RBP24.32■■□□□ 1.48
CACNB3-218ENST00000550771 GPCPD1Q9NPB8 672 aa24.32■■□□□ 1.48
CACNB3-218ENST00000550771 AAMPQ13685 434 aa24.31■■□□□ 1.48
CACNB3-218ENST00000550771 AKNAD1Q5T1N1 836 aa24.31■■□□□ 1.48
CACNB3-218ENST00000550771 TMEM63BQ5T3F8 832 aa24.31■■□□□ 1.48
CACNB3-218ENST00000550771 MFSD6Q6ZSS7 791 aa24.31■■□□□ 1.48
CACNB3-218ENST00000550771 HERVK_113Q902F9 699 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms