RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ADD3Q9UEY8 706 aaKnown RBP27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 PNMA2Q9UL42 364 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 Q9Y3F1 56 aa27.24■■□□□ 1.95
SMARCD1-209ENST00000550477 SOWAHBA6NEL2 793 aa27.23■■□□□ 1.95
SMARCD1-209ENST00000550477 PSRC1Q6PGN9 363 aaPredicted RBP27.23■■□□□ 1.95
SMARCD1-209ENST00000550477 FAM126BQ8IXS8 530 aa27.23■■□□□ 1.95
SMARCD1-209ENST00000550477 COL25A1Q9BXS0 654 aaPredicted RBP27.23■■□□□ 1.95
SMARCD1-209ENST00000550477 CUL9Q8IWT3 2517 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 DYNC1LI2O43237 492 aaPredicted RBP27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 NMT2O60551 498 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 ICAM1P05362 532 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 DNAJB2P25686 324 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 IRX5P78411 483 aaPredicted RBP27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 BEX3Q00994 111 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 FSCN1Q16658 493 aaKnown RBP27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 MCMDC2Q4G0Z9 681 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.22■■□□□ 1.954e-6■■■□□ 18.8
SMARCD1-209ENST00000550477 VTA1Q9NP79 307 aa27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 GNEQ9Y223 722 aaKnown RBP27.22■■□□□ 1.95
SMARCD1-209ENST00000550477 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 TOP1P11387 765 aaKnown RBP27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 RRP12Q5JTH9 1297 aaKnown RBP27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 CXCL17Q6UXB2 119 aa27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 TIFAQ96CG3 184 aa27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 MPHOSPH6Q99547 160 aaKnown RBP27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 PPP1R12CQ9BZL4 782 aa27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 INCENPQ9NQS7 918 aa27.21■■□□□ 1.95
SMARCD1-209ENST00000550477 LOC102724159A0A0B4J2E5 919 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 CSF2RAP15509 400 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 SNAP25P60880 206 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 ITGA7Q13683 1181 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 PWP2Q15269 919 aaKnown RBP27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 MUM1L1Q5H9M0 696 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 KIAA1211Q6ZU35 1233 aa27.2■■□□□ 1.94
SMARCD1-209ENST00000550477 A0A0C4DFX4 3053 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 FGRP09769 529 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 NOVP48745 357 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 PDE1AP54750 535 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 RRP1P56182 461 aaKnown RBP27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 TMEM240Q5SV17 173 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 VPS53Q5VIR6 699 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 EEPD1Q7L9B9 569 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 ZNF576Q9H609 170 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 TCP11L1Q9NUJ3 509 aa27.19■■□□□ 1.94
SMARCD1-209ENST00000550477 SALL3Q9BXA9 1300 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 CTAGE5O15320 804 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 CD4P01730 458 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 FGAP02671 866 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 PCP11498 1178 aaKnown RBP27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 SMPD1P17405 629 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 MFAP1P55081 439 aaKnown RBP27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 SYDE2Q5VT97 1194 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 BTNL9Q6UXG8 535 aa27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 RANBP17Q9H2T7 1088 aaKnown RBP27.18■■□□□ 1.94
SMARCD1-209ENST00000550477 FOXP2O15409 715 aa27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 BRDTQ58F21 947 aaPredicted RBP27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 ZNF365Q70YC5 407 aa27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 FBXO16Q8IX29 292 aaPredicted RBP27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 SYMPKQ92797 1274 aaKnown RBP27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 TTC14Q96N46 770 aa27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 HIPK3Q9H422 1215 aa27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 IL23AQ9NPF7 189 aa27.17■■□□□ 1.94
SMARCD1-209ENST00000550477 PTPDC1A2A3K4 754 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 TRIM6-TRIM34B2RNG4 842 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 B4DLN1 442 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 MRPL12P52815 198 aaKnown RBP27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 HDAC1Q13547 482 aaPredicted RBP27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 BAATQ14032 418 aaPredicted RBP27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 TAPT1Q6NXT6 567 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 MFSD6Q6ZSS7 791 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 SLC43A3Q8NBI5 491 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 GAS2L1Q99501 681 aaPredicted RBP27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 TMEM47Q9BQJ4 181 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 PDGFCQ9NRA1 345 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 MSRAQ9UJ68 235 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 ASTN1O14525 1302 aa27.16■■□□□ 1.94
SMARCD1-209ENST00000550477 FGBP02675 491 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 ACRP10323 421 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 HSPD1P10809 573 aaKnown RBP27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 CYP2C18P33260 490 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 SLC16A2P36021 539 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 GRIN2CQ14957 1233 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 RPUSD2Q8IZ73 545 aaKnown RBP27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 MORC4Q8TE76 937 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 RNF41Q9H4P4 317 aaPredicted RBP27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 GPCPD1Q9NPB8 672 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 GPHNQ9NQX3 736 aaPredicted RBP27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 POLR3EQ9NVU0 708 aa27.15■■□□□ 1.94
SMARCD1-209ENST00000550477 LAMA2P24043 3122 aaKnown RBP27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 SUPT20HL2P0C7V6 817 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 ALDH5A1P51649 535 aaPredicted RBP27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 AAMPQ13685 434 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 RAB30Q15771 203 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 DUSP28Q4G0W2 176 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 TTBK2Q6IQ55 1244 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 C16orf59Q7L2K0 433 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 FAM227BQ96M60 508 aa27.14■■□□□ 1.94
SMARCD1-209ENST00000550477 ZMYM6O95789 1325 aa27.14■■□□□ 1.93
SMARCD1-209ENST00000550477 FRMPD2Q68DX3 1309 aaPredicted RBP27.14■■□□□ 1.93
SMARCD1-209ENST00000550477 CPT1AP50416 773 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms