RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 YEATS4O95619 227 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 NASPP49321 788 aaPredicted RBP13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 STK38Q15208 465 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 MCTP2Q6DN12 878 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 ATG4CQ96DT6 458 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 FTOQ9C0B1 505 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 CCPG1Q9ULG6 757 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 PTPRFP10586 1907 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 PCNTO95613 3336 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 GJA5P36382 358 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 TOB1P50616 345 aaPredicted RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 HUNKP57058 714 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 PABPC4Q13310 644 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 SKOR2Q2VWA4 1001 aaPredicted RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
CTDSP2-206ENST00000550144 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 ZNF536O15090 1300 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 TCHHQ07283 1943 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 TOMM70O94826 608 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 CETPP11597 493 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 GTF2A2P52657 109 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 OAZ1P54368 228 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 IRX3P78415 501 aaPredicted RBP13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 HTRA3P83110 453 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 UBE2SQ16763 222 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 TTC38Q5R3I4 469 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
CTDSP2-206ENST00000550144 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 SPTLC2O15270 562 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 TRAK2O60296 914 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 BMP15O95972 392 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 ALAS1P13196 640 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 OSBPP22059 807 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 ME1P48163 572 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 UBE2HP62256 183 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 MOGSQ13724 837 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 INF2Q27J81 1249 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 USP17L6PQ6QN14 398 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
CTDSP2-206ENST00000550144 RLFQ13129 1914 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 SPDYE3A6NKU9 549 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 MEIS2O14770 477 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 OPLAHO14841 1288 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 MBD3O95983 291 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 CFBP00751 764 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 FOSP01100 380 aaPredicted RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 PTPAQ15257 358 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 CCL15Q16663 113 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
CTDSP2-206ENST00000550144 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms