RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 HIP1O00291 1037 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 ZNF213O14771 459 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 ITGB8P26012 769 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 NT5C2P49902 561 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 KCNA10Q16322 511 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 DSCC1Q9BVC3 393 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 IL25Q9H293 177 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 PRDM5Q9NQX1 630 aaPredicted RBP15.82■□□□□ 0.12
GCN1-206ENST00000549815 DIAPH3Q9NSV4 1193 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 CCPG1Q9ULG6 757 aa15.82■□□□□ 0.12
GCN1-206ENST00000549815 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
GCN1-206ENST00000549815 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.81■□□□□ 0.12
GCN1-206ENST00000549815 KIAA0355O15063 1070 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 ZNF543Q08ER8 600 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 ANKRD33Q7Z3H0 272 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 DGKHQ86XP1 1220 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 MORC4Q8TE76 937 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 ESR2Q92731 530 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 BADQ92934 168 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 PURBQ96QR8 312 aaKnown RBP15.81■□□□□ 0.12
GCN1-206ENST00000549815 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 STARD7Q9NQZ5 370 aa15.81■□□□□ 0.12
GCN1-206ENST00000549815 GNEQ9Y223 722 aaKnown RBP15.81■□□□□ 0.12
GCN1-206ENST00000549815 ELP1O95163 1332 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 ASB14A6NK59 587 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 ASGR1P07306 291 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 CLTBP09497 229 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 C6orf222P0C671 652 aaPredicted RBP15.8■□□□□ 0.12
GCN1-206ENST00000549815 GSPT1P15170 499 aaKnown RBP15.8■□□□□ 0.12
GCN1-206ENST00000549815 CDK7P50613 346 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 FAAP100Q0VG06 881 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 ANKS1AQ92625 1134 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 TOX2Q96NM4 488 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
GCN1-206ENST00000549815 NFIBO00712 420 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 PQBP1O60828 265 aaKnown RBP15.79■□□□□ 0.12
GCN1-206ENST00000549815 TNFAIP2Q03169 654 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 SHHQ15465 462 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 TTC22Q5TAA0 569 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 Q7L0L9 218 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 PCSK9Q8NBP7 692 aaKnown RBP15.79■□□□□ 0.12
GCN1-206ENST00000549815 PDGFCQ9NRA1 345 aa15.79■□□□□ 0.12
GCN1-206ENST00000549815 WDR19Q8NEZ3 1342 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 KDM4AO75164 1064 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 SMPD1P17405 629 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 PTGS1P23219 599 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
GCN1-206ENST00000549815 TMEM63BQ5T3F8 832 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
GCN1-206ENST00000549815 B4E1Z4 1266 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 GOLGA8HP0CJ92 632 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.12
GCN1-206ENST00000549815 EPHB4P54760 987 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 BEX3Q00994 111 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 CCDC178Q5BJE1 867 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 GNASQ5JWF2 1037 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 GPATCH4Q5T3I0 446 aaKnown RBP15.77■□□□□ 0.12
GCN1-206ENST00000549815 SLC30A10Q6XR72 485 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 FBXO16Q8IX29 292 aaPredicted RBP15.77■□□□□ 0.12
GCN1-206ENST00000549815 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 ZSWIM5Q9P217 1185 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 TBX21Q9UL17 535 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 PNMA2Q9UL42 364 aa15.77■□□□□ 0.12
GCN1-206ENST00000549815 LOC102724159A0A0B4J2E5 919 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 ARVCFO00192 962 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 PWP2Q15269 919 aaKnown RBP15.76■□□□□ 0.11
GCN1-206ENST00000549815 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
GCN1-206ENST00000549815 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 FAM109BQ6ICB4 259 aaPredicted RBP15.76■□□□□ 0.11
GCN1-206ENST00000549815 EEPD1Q7L9B9 569 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 TLK2Q86UE8 772 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 ENAHQ8N8S7 591 aaPredicted RBP15.76■□□□□ 0.11
GCN1-206ENST00000549815 PNMA1Q8ND90 353 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
GCN1-206ENST00000549815 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 TMEM39AQ9NV64 488 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 Q9Y3F1 56 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 CDH23Q9H251 3354 aa15.76■□□□□ 0.11
GCN1-206ENST00000549815 RAD50Q92878 1312 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
GCN1-206ENST00000549815 RBM47A0AV96 593 aaKnown RBP15.75■□□□□ 0.11
GCN1-206ENST00000549815 DCDC2CA8MYV0 355 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 RAG1P15918 1043 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 RPS6P62753 249 aaKnown RBP15.75■□□□□ 0.11
GCN1-206ENST00000549815 RNF207Q6ZRF8 634 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 FAM126BQ8IXS8 530 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 SLC43A3Q8NBI5 491 aa15.75■□□□□ 0.11
GCN1-206ENST00000549815 ADD3Q9UEY8 706 aaKnown RBP15.75■□□□□ 0.11
GCN1-206ENST00000549815 TNKSO95271 1327 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms