RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ADAM21Q9UKJ8 722 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 MAP9Q49MG5 647 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 NSUN4Q96CB9 384 aaKnown RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 PACSIN2Q9UNF0 486 aaPredicted RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 MRFAP1Q9Y605 127 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 ESYT3A0FGR9 886 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 USP17L5A8MUK1 530 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 DDX39AO00148 427 aaKnown RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 ATP1A1P05023 1023 aaKnown RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 PLEKP08567 350 aaPredicted RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 PMS1P54277 932 aaKnown RBP15.79■□□□□ 0.12
CACNB3-209ENST00000548860 PKN1Q16512 942 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 PCDHA4Q9UN74 947 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 FHOD1Q9Y613 1164 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 NFAT5O94916 1531 aa15.79■□□□□ 0.12
CACNB3-209ENST00000548860 RNF225M0QZC1 329 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 PNKPQ96T60 521 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 ANKRD2Q9GZV1 360 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 XDHP47989 1333 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 FAM205AQ6ZU69 1335 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 HGSO14964 777 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 SASH3O75995 380 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 FTCDO95954 541 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 STK4Q13043 487 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 FAM204AQ9H8W3 233 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 ARPP21Q9UBL0 812 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 POLR2FP61218 127 aaKnown RBP15.78■□□□□ 0.12
CACNB3-209ENST00000548860 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 SFI1A8K8P3 1242 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 ERVK-24P63145 666 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 SP4Q02446 784 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 ALX1Q15699 326 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 FAM114A1Q8IWE2 563 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
CACNB3-209ENST00000548860 TDP2O95551 362 aa15.77■□□□□ 0.12
CACNB3-209ENST00000548860 HSD3B7Q9H2F3 369 aa15.77■□□□□ 0.12
CACNB3-209ENST00000548860 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
CACNB3-209ENST00000548860 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 H7C1D1 291 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 TUBB4AP04350 444 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 CASP8Q14790 479 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 NEK8Q86SG6 692 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 NYXQ9GZU5 481 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 GOLGB1Q14789 3259 aaKnown RBP15.77■□□□□ 0.11
CACNB3-209ENST00000548860 LMTK3Q96Q04 1460 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 TLDC2A0PJX2 215 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 FGFR2P21802 821 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 GRIK5Q16478 980 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 MICALL1Q8N3F8 863 aa15.77■□□□□ 0.11
CACNB3-209ENST00000548860 NHEJ1Q9H9Q4 299 aaPredicted RBP15.77■□□□□ 0.11
CACNB3-209ENST00000548860 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 NTSR2O95665 410 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 MAP3K9P80192 1104 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 SLC30A10Q6XR72 485 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 CERS3Q8IU89 383 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 MB21D1Q8N884 522 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 UHMK1Q8TAS1 419 aaKnown RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 BSDC1Q9NW68 430 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 BICDL2A1A5D9 508 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 DDAH1O94760 285 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 EHHADHQ08426 723 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 PFKFB3Q16875 520 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 CEP95Q96GE4 821 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 TRIM66O15016 1216 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 EIF4A3P38919 411 aaKnown RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 SSR1P43307 286 aaKnown RBP15.76■□□□□ 0.11
CACNB3-209ENST00000548860 GSTO1P78417 241 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 USP17L6PQ6QN14 398 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 MMS19Q96T76 1030 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 GOLPH3Q9H4A6 298 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 L2HGDHQ9H9P8 463 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
CACNB3-209ENST00000548860 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
CACNB3-209ENST00000548860 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
CACNB3-209ENST00000548860 JCADQ9P266 1359 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms