RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CYP39A1Q9NYL5 469 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 DDX49Q9Y6V7 483 aaKnown RBP20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 NEDD4P46934 1319 aa20.52■□□□□ 0.87
CHMP1A-205ENST00000548650 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.87
CHMP1A-205ENST00000548650 PCP11498 1178 aaKnown RBP20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 SLC16A2P36021 539 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 NKX3-2P78367 333 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 SYDE2Q5VT97 1194 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 TOX2Q96NM4 488 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 ELP1O95163 1332 aa20.51■□□□□ 0.87
CHMP1A-205ENST00000548650 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 ASB14A6NK59 587 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 ASGR1P07306 291 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 PDHBP11177 359 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 FAAP100Q0VG06 881 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 FAM109BQ6ICB4 259 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 PCSK9Q8NBP7 692 aaKnown RBP20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 SPC25Q9HBM1 224 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
CHMP1A-205ENST00000548650 EPHB4P54760 987 aa20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 MFAP1P55081 439 aaKnown RBP20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 NSMFQ6X4W1 530 aa20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 TBX21Q9UL17 535 aa20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 GNEQ9Y223 722 aaKnown RBP20.49■□□□□ 0.87
CHMP1A-205ENST00000548650 SNHG28P0DPA3 235 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 RAG1P15918 1043 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 TNFAIP2Q03169 654 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 GNASQ5JWF2 1037 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 MORC4Q8TE76 937 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 GUCD1Q96NT3 240 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 RNF41Q9H4P4 317 aaPredicted RBP20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 TMEM39AQ9NV64 488 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 MROH7Q68CQ1 1323 aa20.48■□□□□ 0.87
CHMP1A-205ENST00000548650 A0A0U1RQG5 324 aaPredicted RBP20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 DCDC2CA8MYV0 355 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 NFIBO00712 420 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 PTGS1P23219 599 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 CDK7P50613 346 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 TLK2Q86UE8 772 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 TTC14Q96N46 770 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 DIAPH3Q9NSV4 1193 aa20.47■□□□□ 0.87
CHMP1A-205ENST00000548650 SMPD1P17405 629 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 BEX3Q00994 111 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 FPGSQ05932 587 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 ESR2Q92731 530 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 MYH6P13533 1939 aa20.46■□□□□ 0.87
CHMP1A-205ENST00000548650 SLC30A10Q6XR72 485 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 EEPD1Q7L9B9 569 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 FAM126BQ8IXS8 530 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 SLC17A8Q8NDX2 589 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 VTA1Q9NP79 307 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 WDR19Q8NEZ3 1342 aa20.45■□□□□ 0.86
CHMP1A-205ENST00000548650 ARVCFO00192 962 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 ZNF213O14771 459 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 NT5C2P49902 561 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 ALDH5A1P51649 535 aaPredicted RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 SMAD3P84022 425 aaKnown RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 BAATQ14032 418 aaPredicted RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 FSCN1Q16658 493 aaKnown RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 ZNF697Q5TEC3 545 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 NOL8Q76FK4 1167 aaKnown RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 RNPC3Q96LT9 517 aaKnown RBP20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 FAM161BQ96MY7 647 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 ZKSCAN3Q9BRR0 538 aa20.44■□□□□ 0.86
CHMP1A-205ENST00000548650 CDH23Q9H251 3354 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 HIP1O00291 1037 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 KDM4AO75164 1064 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 TIMP1P01033 207 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 CXCL17Q6UXB2 119 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 DGKHQ86XP1 1220 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 DSCC1Q9BVC3 393 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 IL25Q9H293 177 aa20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
CHMP1A-205ENST00000548650 CUL9Q8IWT3 2517 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 LOC102724159A0A0B4J2E5 919 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 PTPDC1A2A3K4 754 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 PWP2Q15269 919 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 GPATCH4Q5T3I0 446 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 SLC43A3Q8NBI5 491 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 VTI1AQ96AJ9 217 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 PNMA2Q9UL42 364 aa20.42■□□□□ 0.86
CHMP1A-205ENST00000548650 CABYRO75952 493 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 CD4P01730 458 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 GOLGA8HP0CJ92 632 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 IQSEC1Q6DN90 963 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
CHMP1A-205ENST00000548650 AP5M1Q9H0R1 490 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms