RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 SLC38A10Q9HBR0 1119 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 FBXO28Q9NVF7 368 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
CACNB3-206ENST00000547693 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 CEP131Q9UPN4 1083 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.49
CACNB3-206ENST00000547693 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 VWA5AO00534 786 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 LBX1P52954 281 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 TKFCQ3LXA3 575 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 FOXD4L6Q3SYB3 417 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 USH1GQ495M9 461 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 FOXD4L3Q6VB84 417 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
CACNB3-206ENST00000547693 ADAMTS5Q9UNA0 930 aa11.95□□□□□ -0.5
CACNB3-206ENST00000547693 PTPRFP10586 1907 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 BMP15O95972 392 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 MCM4P33991 863 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 COPB2P35606 906 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 SNAP25P60880 206 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 DGKZQ13574 1117 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 CCL15Q16663 113 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 LBX2Q6XYB7 198 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 ANKRD23Q86SG2 305 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 CPXCR1Q8N123 301 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 NAP1L4Q99733 375 aaKnown RBP11.94□□□□□ -0.5
CACNB3-206ENST00000547693 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
CACNB3-206ENST00000547693 GOLGA6L4A6NEF3 574 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 POLR2MP0CAP2 368 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 ALAS1P13196 640 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 VEGFBP49765 207 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 NR5A1Q13285 461 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 AP3B2Q13367 1082 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 NONOQ15233 471 aaKnown RBP eCLIP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 SF3A1Q15459 793 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 P2RX7Q99572 595 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 TEX13BQ9BXU2 312 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 RAVER2Q9HCJ3 691 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 ZCCHC17Q9NP64 241 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 TFIP11Q9UBB9 837 aaKnown RBP11.93□□□□□ -0.5
CACNB3-206ENST00000547693 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
CACNB3-206ENST00000547693 TCHHQ07283 1943 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 RASSF10A6NK89 507 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 KIF28PB7ZC32 967 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 PIK3CDO00329 1044 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 GJA5P36382 358 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 STAT3P40763 770 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 GCLCP48506 637 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-206ENST00000547693 HERVK_113P62684 666 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 PLS1Q14651 629 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 STK38Q15208 465 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 PIK3AP1Q6ZUJ8 805 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-206ENST00000547693 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 AGBL1Q96MI9 1066 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-206ENST00000547693 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 BIN2Q9UBW5 565 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-206ENST00000547693 FBXO40Q9UH90 709 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
CACNB3-206ENST00000547693 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-206ENST00000547693 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-206ENST00000547693 M0R2N6 131 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 PDHXO00330 501 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 YEATS4O95619 227 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 SLC25A27O95847 323 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 CFBP00751 764 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
CACNB3-206ENST00000547693 ORC2Q13416 577 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-206ENST00000547693 MOGSQ13724 837 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 NPY5RQ15761 445 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 SKOR2Q2VWA4 1001 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-206ENST00000547693 JAKMIP3Q5VZ66 844 aa11.91□□□□□ -0.5
CACNB3-206ENST00000547693 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms