RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SNHG28P0DPA3 235 aa17.46■□□□□ 0.38
BRF1-212ENST00000547562 PMS1P54277 932 aaKnown RBP17.46■□□□□ 0.38
BRF1-212ENST00000547562 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.38
BRF1-212ENST00000547562 CREBRFQ8IUR6 639 aa17.46■□□□□ 0.38
BRF1-212ENST00000547562 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.38
BRF1-212ENST00000547562 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.38
BRF1-212ENST00000547562 MNS1Q8NEH6 495 aa17.46■□□□□ 0.38
BRF1-212ENST00000547562 PSMA7O14818 248 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
BRF1-212ENST00000547562 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
BRF1-212ENST00000547562 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
BRF1-212ENST00000547562 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 H2AFXP16104 143 aaPredicted RBP17.45■□□□□ 0.38
BRF1-212ENST00000547562 TECP42680 631 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 THAP9Q9H5L6 903 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 ABHD10Q9NUJ1 306 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 SERPINB13Q9UIV8 391 aa17.45■□□□□ 0.38
BRF1-212ENST00000547562 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 TADA3O75528 432 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
BRF1-212ENST00000547562 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 TMTC1Q8IUR5 882 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 UBXN4Q92575 508 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
BRF1-212ENST00000547562 CARD6Q9BX69 1037 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 TRIM9Q9C026 710 aa17.44■□□□□ 0.38
BRF1-212ENST00000547562 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
BRF1-212ENST00000547562 EFCAB8A8MWE9 144 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 TTLL1O95922 423 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 SRGNP10124 158 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 EIF6P56537 245 aaKnown RBP17.43■□□□□ 0.38
BRF1-212ENST00000547562 UBXN1Q04323 297 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 PROM2Q8N271 834 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 TRIM47Q96LD4 638 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 C7orf25Q9BPX7 421 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 MMTAG2Q9BU76 263 aaKnown RBP17.43■□□□□ 0.38
BRF1-212ENST00000547562 SWAP70Q9UH65 585 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
BRF1-212ENST00000547562 ADCY7P51828 1080 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 TTI2Q6NXR4 508 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 CLEC10AQ8IUN9 316 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 CCDC47Q96A33 483 aaKnown RBP17.43■□□□□ 0.38
BRF1-212ENST00000547562 COA7Q96BR5 231 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 DHTKD1Q96HY7 919 aaPredicted RBP17.43■□□□□ 0.38
BRF1-212ENST00000547562 LZTFL1Q9NQ48 299 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
BRF1-212ENST00000547562 RNF225M0QZC1 329 aaPredicted RBP17.42■□□□□ 0.38
BRF1-212ENST00000547562 HSPA1LP34931 641 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 MXD3Q9BW11 206 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 NPR1P16066 1061 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 ERVK-24P63145 666 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
BRF1-212ENST00000547562 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 IRX2Q9BZI1 471 aaPredicted RBP17.42■□□□□ 0.38
BRF1-212ENST00000547562 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
BRF1-212ENST00000547562 SHMT1P34896 483 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 TXKP42681 527 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 SCNN1DP51172 638 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 ASIC1P78348 528 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 AMPD3Q01432 767 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 PDE4DQ08499 809 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 CALCRLQ16602 461 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 CYP26C1Q6V0L0 522 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 MB21D1Q8N884 522 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
BRF1-212ENST00000547562 A0A0U1RQJ8 604 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 A0A1W2PQC6 194 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 KRT9P35527 623 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 CDC42EP5Q6NZY7 148 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 HHIPL2Q6UWX4 724 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 ZNF507Q8TCN5 953 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 GTPBP4Q9BZE4 634 aaKnown RBP17.41■□□□□ 0.38
BRF1-212ENST00000547562 JMJD4Q9H9V9 463 aa17.41■□□□□ 0.38
BRF1-212ENST00000547562 MAGEC2Q9UBF1 373 aaPredicted RBP17.41■□□□□ 0.38
BRF1-212ENST00000547562 PNMA6FA0A0J9YX94 578 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
BRF1-212ENST00000547562 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
BRF1-212ENST00000547562 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 DUSP9Q99956 384 aaKnown RBP17.4■□□□□ 0.38
BRF1-212ENST00000547562 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 BICDL2A1A5D9 508 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 SLC37A4O43826 429 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 EDIL3O43854 480 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms