RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	ISCU	Q9H1K1	167 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SH2D4A	Q9H788	454 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	KCNG1	Q9UIX4	513 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	PLAGL2	Q9UPG8	496 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.26	□□□□□ -0.61
UBC-213	ENST00000546120	SLC12A7	Q9Y666	1083 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	MET	P08581	1390 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	UBR1	Q8IWV7	1749 aa		11.26	□□□□□ -0.61
UBC-213	ENST00000546120	TTC26	A0AVF1	554 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	ZNF233	A6NK53	670 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	GOLGA8A	A7E2F4	631 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	BTNL10	A8MVZ5	291 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC188	H7C350	402 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	FGA	P02671	866 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	PARP1	P09874	1014 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	MYBL2	P10244	700 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	BLMH	Q13867	455 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	BYSL	Q13895	437 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC152	Q4G0S7	254 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	RRAGB	Q5VZM2	374 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	HAUS3	Q68CZ6	603 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	NAIF1	Q69YI7	327 aa	Predicted RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	DDX46	Q7L014	1031 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	MAATS1	Q7Z4T9	603 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	LMNTD2	Q8IXW0	634 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	DIS3L2	Q8IYB7	885 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	TRMT44	Q8IYL2	757 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	KCNH5	Q8NCM2	988 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	LZIC	Q8WZA0	190 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	HVCN1	Q96D96	273 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	CHMP6	Q96FZ7	201 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	ACSBG1	Q96GR2	724 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	PBK	Q96KB5	322 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC43	Q96MW1	224 aa	Known RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	DBNDD2	Q9BQY9	259 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	RNF26	Q9BY78	433 aa	Predicted RBP	11.25	□□□□□ -0.61
UBC-213	ENST00000546120	SENP2	Q9HC62	589 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	EXOC1	Q9NV70	894 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	SAMD15	Q9P1V8	674 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	SLC12A6	Q9UHW9	1150 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	EID1	Q9Y6B2	187 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	ATRN	O75882	1429 aa		11.25	□□□□□ -0.61
UBC-213	ENST00000546120	ENO4	A6NNW6	628 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120		O00370	1275 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.24	□□□□□ -0.61	5e-6	■■□□□ 12.5
UBC-213	ENST00000546120	RTN3	O95197	1032 aa	Predicted RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	TRIM21	P19474	475 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	LONP1	P36776	959 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	ZRSR2	Q15696	482 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	SGSM1	Q2NKQ1	1148 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	OTUD7B	Q6GQQ9	843 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	MIS18BP1	Q6P0N0	1132 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	BZW1	Q7L1Q6	419 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	ARHGAP18	Q8N392	663 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	MIPOL1	Q8TD10	442 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	NELFB	Q8WX92	580 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	FAM212A	Q96EL1	285 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	CAPZA3	Q96KX2	299 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	IFIH1	Q9BYX4	1025 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	OSBPL7	Q9BZF2	842 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	TTYH3	Q9C0H2	523 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	INCENP	Q9NQS7	918 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	SLC12A4	Q9UP95	1085 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	DIS3	Q9Y2L1	958 aa	Known RBP	11.24	□□□□□ -0.61
UBC-213	ENST00000546120	RIPOR2	Q9Y4F9	1068 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120	LMO7	Q8WWI1	1683 aa		11.24	□□□□□ -0.61
UBC-213	ENST00000546120		A6NHS1	94 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	RASSF10	A6NK89	507 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	RBAK-RBAKDN	I3L0D1	243 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ENC1	O14682	589 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	RNMT	O43148	476 aa	Known RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	NPTXR	O95502	500 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	IGKV5-2	P06315	115 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	GSTA2	P09210	222 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CALM1	P0DP23	149 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CALM2	P0DP24	149 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CALM3	P0DP25	149 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	PC	P11498	1178 aa	Known RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	RPS6KA3	P51812	740 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ANTXR2	P58335	489 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	LACTB	P83111	547 aa	Predicted RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ATP11A	P98196	1134 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	HDLBP	Q00341	1268 aa	Known RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	GUCY1A3	Q02108	690 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	PDIA5	Q14554	519 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	UBE3C	Q15386	1083 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	SKIDA1	Q1XH10	827 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC96	Q2M329	555 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CWF19L2	Q2TBE0	894 aa	Known RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ODF2	Q5BJF6	829 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	WDR59	Q6PJI9	974 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	NFXL1	Q6ZNB6	911 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ANKRD13D	Q6ZTN6	518 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	ADSSL1	Q8N142	457 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	NSMCE1	Q8WV22	266 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	CSRNP2	Q9H175	543 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms