RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USP17L13C9JLJ4 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L11C9JVI0 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L18D6R9N7 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L22D6RA61 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L17D6RBQ6 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L19D6RCP7 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L20D6RJB6 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 H0YHG0 523 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 MYO1CO00159 1063 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 N4BP1O75113 896 aaKnown RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 GTF2A1P52655 376 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L24Q0WX57 530 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L6PQ6QN14 398 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TMTC3Q6ZXV5 915 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 SV2BQ7L1I2 683 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TMC4Q7Z404 712 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 NYXQ9GZU5 481 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 SLIT1O75093 1534 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 H3BQF6 201 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TTBK2Q6IQ55 1244 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 KLHL7Q8IXQ5 586 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 FERMT2Q96AC1 680 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TUBGCP2Q9BSJ2 902 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 ANKRD2Q9GZV1 360 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 GBP3Q9H0R5 595 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 CFBP00751 764 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 TXNRD1Q16881 649 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 NAA35Q5VZE5 725 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 CCDC174Q6PII3 467 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 MAP3K14Q99558 947 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 FEZ2Q9UHY8 353 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-203ENST00000546084 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
TRAF1-203ENST00000546084 ERVV-1B6SEH8 477 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
TRAF1-203ENST00000546084 SLC1A4P43007 532 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 PRR16Q569H4 304 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 SGMS1Q86VZ5 419 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 NSUN4Q96CB9 384 aaKnown RBP10.9□□□□□ -0.66
TRAF1-203ENST00000546084 TSG101Q99816 390 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 CLRN2A0PK11 232 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 ZNF185O15231 689 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 ACTN2P35609 894 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 CYLC1P35663 651 aaPredicted RBP10.9□□□□□ -0.66
TRAF1-203ENST00000546084 PAFAH1B1P43034 410 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 GUCY2FP51841 1108 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 AMPD3Q01432 767 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
TRAF1-203ENST00000546084 PRKG1Q13976 671 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 KCTD16Q68DU8 428 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 CYP26C1Q6V0L0 522 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 RIN2Q8WYP3 895 aaPredicted RBP10.9□□□□□ -0.66
TRAF1-203ENST00000546084 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 CEP95Q96GE4 821 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 DUSP10Q9Y6W6 482 aa10.9□□□□□ -0.66
TRAF1-203ENST00000546084 TTC26A0AVF1 554 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 KRT86O43790 486 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 TDP2O95551 362 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 GNA11P29992 359 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 OR8K1Q8NGG5 319 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 AGPAT5Q9NUQ2 364 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 LRRC37A3O60309 1634 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 NTSR2O95665 410 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 BMP15O95972 392 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 KCNA4P22459 653 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 GNAQP50148 359 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 SPAG1Q07617 926 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 CNOT6LQ96LI5 555 aaKnown RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 PNKPQ96T60 521 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 PACSIN2Q9UNF0 486 aaPredicted RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 RRP15Q9Y3B9 282 aaKnown RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 TCRBV5S4A2TA0A5A2 114 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 RASSF7Q02833 373 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 RSRC2Q7L4I2 434 aaKnown RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 POTEDQ86YR6 584 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 SYCP3Q8IZU3 236 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 TAF4BQ92750 862 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 BSDC1Q9NW68 430 aaPredicted RBP10.89□□□□□ -0.67
TRAF1-203ENST00000546084 EHD2Q9NZN4 543 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 LCMT1Q9UIC8 334 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 KIAA1024Q9UPX6 916 aa10.89□□□□□ -0.67
TRAF1-203ENST00000546084 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms