RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 LCMT1Q9UIC8 334 aa21.16■□□□□ 0.98
MSLN-202ENST00000545450 PCDHAC2Q9Y5I4 1007 aa21.16■□□□□ 0.98
MSLN-202ENST00000545450 BAZ2BQ9UIF8 2168 aaKnown RBP21.15■□□□□ 0.98
MSLN-202ENST00000545450 A0A087X0B3 334 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 YDJCA8MPS7 323 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 RPS6KA5O75582 802 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 GYPCP04921 128 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 TUBBP07437 444 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 NT5C2P49902 561 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 PPP2R5BQ15173 497 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 WHAMMP3Q1A5X7 153 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 RASSF4Q9H2L5 321 aa21.15■□□□□ 0.98
MSLN-202ENST00000545450 PLEKHA8P1O95397 391 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 FXR1P51114 621 aaKnown RBP eCLIP21.14■□□□□ 0.98
MSLN-202ENST00000545450 STX17P56962 302 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 FUT2Q10981 343 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 KLHL10Q6JEL2 608 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 ZNF444Q8N0Y2 327 aaPredicted RBP21.14■□□□□ 0.98
MSLN-202ENST00000545450 OXER1Q8TDS5 423 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 PAGE5Q96GU1 130 aa21.14■□□□□ 0.98
MSLN-202ENST00000545450 PPP1R3GB7ZBB8 358 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 TSPY3P0CV98 308 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 TSPY8P0CW00 308 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 CALM1P0DP23 149 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 CALM2P0DP24 149 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 CALM3P0DP25 149 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 SRLQ86TD4 932 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 TMTC1Q8IUR5 882 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 GSDMAQ96QA5 445 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 NAPGQ99747 312 aaPredicted RBP21.14■□□□□ 0.97
MSLN-202ENST00000545450 GBP3Q9H0R5 595 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 SUGCTQ9HAC7 445 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 CABP5Q9NP86 173 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 MYO1AQ9UBC5 1043 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
MSLN-202ENST00000545450 COL4A5P29400 1685 aa21.14■□□□□ 0.97
MSLN-202ENST00000545450 N4BP1O75113 896 aaKnown RBP21.13■□□□□ 0.97
MSLN-202ENST00000545450 IVLP07476 585 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 VSNL1P62760 191 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 ZDHHC15Q96MV8 337 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
MSLN-202ENST00000545450 CTAGE15A4D2H0 777 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 CTAGE8P0CG41 777 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 DPYDQ12882 1025 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 CASP8Q14790 479 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 LEKR1Q6ZMV7 388 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 CTAGE6Q86UF2 777 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 DGKHQ86XP1 1220 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 CTAGE4Q8IX94 777 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 ACRBPQ8NEB7 543 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 EPSTI1Q96J88 318 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
MSLN-202ENST00000545450 RBM28Q9NW13 759 aaKnown RBP21.13■□□□□ 0.97
MSLN-202ENST00000545450 ATP2B1P20020 1258 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 ARHGAP25P42331 645 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 AFMP43652 599 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 RTKN2Q8IZC4 609 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 ANKS1AQ92625 1134 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 RNF26Q9BY78 433 aaPredicted RBP21.12■□□□□ 0.97
MSLN-202ENST00000545450 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 LRRC10BA6NIK2 292 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 TRIM75PA6NK02 468 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 ABL1P00519 1130 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 TFRCP02786 760 aaKnown RBP21.12■□□□□ 0.97
MSLN-202ENST00000545450 RHOXF2BP0C7M4 288 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 ERVK-24P63145 666 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 NFIAQ12857 509 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 PSMD1Q99460 953 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 RHOXF2Q9BQY4 288 aa21.12■□□□□ 0.97
MSLN-202ENST00000545450 RRP15Q9Y3B9 282 aaKnown RBP21.12■□□□□ 0.97
MSLN-202ENST00000545450 TRIM66O15016 1216 aa21.11■□□□□ 0.97
MSLN-202ENST00000545450 GRIPAP1Q4V328 841 aa21.11■□□□□ 0.97
MSLN-202ENST00000545450 MRIQ9BWK5 157 aa21.11■□□□□ 0.97
MSLN-202ENST00000545450 KAT14Q9H8E8 782 aa21.11■□□□□ 0.97
MSLN-202ENST00000545450 SIPA1L1O43166 1804 aa21.11■□□□□ 0.97
MSLN-202ENST00000545450 AMPD2Q01433 879 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 GABPAQ06546 454 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 WWC2Q6AWC2 1192 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 PNMA1Q8ND90 353 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 CTCFLQ8NI51 663 aaPredicted RBP21.1■□□□□ 0.97
MSLN-202ENST00000545450 FAM71BQ8TC56 605 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 LIMA1Q9UHB6 759 aaKnown RBP21.1■□□□□ 0.97
MSLN-202ENST00000545450 hCG_1642624A0A1W2PR95 340 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 CASP1P29466 404 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 HDLBPQ00341 1268 aaKnown RBP21.1■□□□□ 0.97
MSLN-202ENST00000545450 PKN1Q16512 942 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 WDR93Q6P2C0 686 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 C10orf67Q8IYJ2 551 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 SRBD1Q8N5C6 995 aaKnown RBP21.1■□□□□ 0.97
MSLN-202ENST00000545450 SHISA4Q96DD7 197 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 ZNF277Q9NRM2 450 aaPredicted RBP21.1■□□□□ 0.97
MSLN-202ENST00000545450 ABHD10Q9NUJ1 306 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 CNTNAP5Q8WYK1 1306 aa21.1■□□□□ 0.97
MSLN-202ENST00000545450 CYP26C1Q6V0L0 522 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 SMYD4Q8IYR2 804 aaPredicted RBP21.09■□□□□ 0.97
MSLN-202ENST00000545450 NEDD1Q8NHV4 660 aa21.09■□□□□ 0.97
MSLN-202ENST00000545450 SYMPKQ92797 1274 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms