RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
SRRM4-203ENST00000545224 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
SRRM4-203ENST00000545224 JAK2O60674 1132 aa13.15□□□□□ -0.3
SRRM4-203ENST00000545224 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
SRRM4-203ENST00000545224 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
SRRM4-203ENST00000545224 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
SRRM4-203ENST00000545224 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
SRRM4-203ENST00000545224 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
SRRM4-203ENST00000545224 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 DOCK3Q8IZD9 2030 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
SRRM4-203ENST00000545224 SLC25A27O95847 323 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 ERCC3P19447 782 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 LACTBP83111 547 aaPredicted RBP13.14□□□□□ -0.31
SRRM4-203ENST00000545224 GHRHRQ02643 423 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
SRRM4-203ENST00000545224 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 COA7Q96BR5 231 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 AMNQ9BXJ7 453 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 GJD2Q9UKL4 321 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
SRRM4-203ENST00000545224 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 HTTP42858 3142 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 CPLX1O14810 134 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
SRRM4-203ENST00000545224 CHST13Q8NET6 341 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 USP6NLQ92738 828 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
SRRM4-203ENST00000545224 MYH6P13533 1939 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
SRRM4-203ENST00000545224 STXBP3O00186 592 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 NFIBO00712 420 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 CDKL5O76039 1030 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 DEXIO95424 95 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 ALAS1P13196 640 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 SCG2P13521 617 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 CCNA1P78396 465 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 PLS1Q14651 629 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 NPY5RQ15761 445 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 MORN1Q5T089 497 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
SRRM4-203ENST00000545224 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SRRM4-203ENST00000545224 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 MROH8Q9H579 483 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
SRRM4-203ENST00000545224 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 MGAMO43451 1857 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 ABCB11O95342 1321 aa13.12□□□□□ -0.31
SRRM4-203ENST00000545224 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 IGHA2P01877 340 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 PTPREP23469 700 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 MAPK4P31152 587 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 COPB2P35606 906 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 USH1GQ495M9 461 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
SRRM4-203ENST00000545224 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
SRRM4-203ENST00000545224 MAF1Q9H063 256 aa13.11□□□□□ -0.31
SRRM4-203ENST00000545224 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
SRRM4-203ENST00000545224 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
SRRM4-203ENST00000545224 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
SRRM4-203ENST00000545224 LCTP09848 1927 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
SRRM4-203ENST00000545224 MEIS2O14770 477 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 STRNO43815 780 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 PSMC4P43686 418 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 HSD17B4P51659 736 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 GRB14Q14449 540 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 PLEKHH3Q7Z736 793 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 FGD4Q96M96 766 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 ACAD9Q9H845 621 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
SRRM4-203ENST00000545224 FBXO40Q9UH90 709 aa13.1□□□□□ -0.31
SRRM4-203ENST00000545224 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms