RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TLR3O15455 904 aaKnown RBP11.36□□□□□ -0.59
C2CD3-220ENST00000544293 LPXNO60711 386 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 PRDM1O75626 825 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 OAZ1P54368 228 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 FSCN1Q16658 493 aaKnown RBP11.36□□□□□ -0.59
C2CD3-220ENST00000544293 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 OSBP2Q969R2 916 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 SPC25Q9HBM1 224 aa11.36□□□□□ -0.59
C2CD3-220ENST00000544293 CABYRO75952 493 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 CA3P07451 260 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 CYP2C9P11712 490 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 GPNMBQ14956 572 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 TLK2Q86UE8 772 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 RPAP2Q8IXW5 612 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 LRRC47Q8N1G4 583 aaKnown RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 MORC4Q8TE76 937 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 C1QTNF1Q9BXJ1 281 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 BCL11AQ9H165 835 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 ZBTB40Q9NUA8 1239 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 Q9Y3F1 56 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 SLC4A7Q9Y6M7 1214 aa11.35□□□□□ -0.59
C2CD3-220ENST00000544293 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
C2CD3-220ENST00000544293 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 ATP2A2P16615 1042 aaKnown RBP11.34□□□□□ -0.59
C2CD3-220ENST00000544293 SNAP25P60880 206 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 TAP1Q03518 808 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 SLFN13Q68D06 897 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 IQSEC1Q6DN90 963 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
C2CD3-220ENST00000544293 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
C2CD3-220ENST00000544293 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
C2CD3-220ENST00000544293 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.59
C2CD3-220ENST00000544293 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
C2CD3-220ENST00000544293 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 BMP3P12645 472 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 FBXO16Q8IX29 292 aaPredicted RBP11.33□□□□□ -0.6
C2CD3-220ENST00000544293 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
C2CD3-220ENST00000544293 NEDD1Q8NHV4 660 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 RNF146Q9NTX7 359 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 NAV1Q8NEY1 1877 aa11.33□□□□□ -0.6
C2CD3-220ENST00000544293 REV3LO60673 3130 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 ASB14A6NK59 587 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 M0R2C6 588 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 TTLL1O95922 423 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
C2CD3-220ENST00000544293 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
C2CD3-220ENST00000544293 DEFB128Q7Z7B8 93 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 TRERF1Q96PN7 1200 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 CTAGE1Q96RT6 745 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 MTIF3Q9H2K0 278 aaKnown RBP11.32□□□□□ -0.6
C2CD3-220ENST00000544293 INCENPQ9NQS7 918 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 SYNPO2Q9UMS6 1093 aa11.32□□□□□ -0.6
C2CD3-220ENST00000544293 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-220ENST00000544293 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
C2CD3-220ENST00000544293 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 FOXP2O15409 715 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 PLA2G6O60733 806 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 GPR37L1O60883 481 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 MCCP23508 829 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 GRB10Q13322 594 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 KIAA1211Q6ZU35 1233 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-220ENST00000544293 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 SEC62Q99442 399 aaKnown RBP11.31□□□□□ -0.6
C2CD3-220ENST00000544293 AP5M1Q9H0R1 490 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
C2CD3-220ENST00000544293 TNKSO95271 1327 aa11.31□□□□□ -0.6
C2CD3-220ENST00000544293 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
C2CD3-220ENST00000544293 PI4K2BG5E9Z4 385 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 GPAA1O43292 621 aa11.3□□□□□ -0.6
C2CD3-220ENST00000544293 FDX1P10109 184 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms