RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TCP11Q8WWU5 503 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 KRT12Q99456 494 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 MST1RQ04912 1400 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 H7C1D1 291 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 RPN1P04843 607 aaKnown RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 SCTRP47872 440 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 ADCY2Q08462 1091 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 GRIK3Q13003 919 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 ANKRD20A8PQ5CZ79 823 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 TTC5Q8N0Z6 440 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMG8-202ENST00000543872 WDR19Q8NEZ3 1342 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 SLIT1O75093 1534 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 CLTAP09496 248 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 TCP1P17987 556 aaKnown RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 CACNA2D3Q8IZS8 1091 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 PARD3BQ8TEW8 1205 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 STAMBPL1Q96FJ0 436 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 MTRQ99707 1265 aa14.05□□□□□ -0.16
SMG8-202ENST00000543872 BSDC1Q9NW68 430 aaPredicted RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.05□□□□□ -0.16
SMG8-202ENST00000543872 WDR17Q8IZU2 1322 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ANKRD33BA6NCL7 494 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ENO4A6NNW6 628 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 RTN2O75298 545 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 CSB-PGBD3P0DP91 1061 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 SLC8A1P32418 973 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 CASP7P55210 303 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ZNF658Q5TYW1 1059 aaPredicted RBP14.04□□□□□ -0.16
SMG8-202ENST00000543872 KLHL7Q8IXQ5 586 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ALS2CR12Q96Q35 445 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 LEMD3Q9Y2U8 911 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 ZNF330Q9Y3S2 320 aaPredicted RBP14.04□□□□□ -0.16
SMG8-202ENST00000543872 PCDHA13Q9Y5I0 950 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 HEG1Q9ULI3 1381 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 EIF4E1BA6NMX2 242 aaKnown RBP14.04□□□□□ -0.16
SMG8-202ENST00000543872 WTAPQ15007 396 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
SMG8-202ENST00000543872 TUBGCP2Q9BSJ2 902 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 NAPBQ9H115 298 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 PXDNQ92626 1479 aa14.04□□□□□ -0.16
SMG8-202ENST00000543872 DNM2P50570 870 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ITGB3BPQ13352 177 aaPredicted RBP14.03□□□□□ -0.16
SMG8-202ENST00000543872 SGMS1Q86VZ5 419 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ARMC2Q8NEN0 867 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 PIK3R5Q8WYR1 880 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 HVCN1Q96D96 273 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 SPATS2LQ9NUQ6 558 aaKnown RBP14.03□□□□□ -0.16
SMG8-202ENST00000543872 L3MBTL1Q9Y468 752 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 NRXN3Q9Y4C0 1643 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ERICH2A1L162 156 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 TTC36A6NLP5 189 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
SMG8-202ENST00000543872 MCM7P33993 719 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 SNX1Q13596 522 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 CCDC170Q8IYT3 715 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ATP6V0A4Q9HBG4 840 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 NOD2Q9HC29 1040 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 EXOC1Q9NV70 894 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 HMGB1P1B2RPK0 211 aaPredicted RBP14.03□□□□□ -0.16
SMG8-202ENST00000543872 MAGEA1P43355 309 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 DRP2Q13474 957 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ARFGAP2Q8N6H7 521 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
SMG8-202ENST00000543872 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
SMG8-202ENST00000543872 ZNF532Q9HCE3 1301 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 STK36Q9NRP7 1315 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.16
SMG8-202ENST00000543872 MYZAPP0CAP1 466 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 EIF4A3P38919 411 aaKnown RBP14.02□□□□□ -0.16
SMG8-202ENST00000543872 ZBED6P86452 979 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 TMC4Q7Z404 712 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 ZNF507Q8TCN5 953 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 PAGR1Q9BTK6 254 aa14.02□□□□□ -0.16
SMG8-202ENST00000543872 FAM207AQ9NSI2 230 aaPredicted RBP14.02□□□□□ -0.16
SMG8-202ENST00000543872 RASSF7Q02833 373 aa14.02□□□□□ -0.17
SMG8-202ENST00000543872 MEA1Q16626 185 aa14.02□□□□□ -0.17
SMG8-202ENST00000543872 CFAP221Q4G0U5 840 aa14.02□□□□□ -0.17
SMG8-202ENST00000543872 TTC38Q5R3I4 469 aa14.02□□□□□ -0.17
SMG8-202ENST00000543872 TLDC1Q6P9B6 456 aa14.02□□□□□ -0.17
SMG8-202ENST00000543872 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms