RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 LRRC10BA6NIK2 292 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 G3V3G9 751 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 SHMT1P34896 483 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 KRT31Q15323 416 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 DCAF8Q5TAQ9 597 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 APOBEC3HQ6NTF7 200 aaKnown RBP15.67■□□□□ 0.1
MSH2-206ENST00000543555 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 PLIN2Q99541 437 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 MAGEF1Q9HAY2 307 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 KLRC4O43908 158 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 KCNA3P22001 575 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 KMT5BQ4FZB7 885 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 DNAI1Q9UI46 699 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
MSH2-206ENST00000543555 ADAMTSL1Q8N6G6 1762 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 ITIH6Q6UXX5 1313 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 PLCG1P19174 1290 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
MSH2-206ENST00000543555 PTGER2P43116 358 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 RBL2Q08999 1139 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 CCDC94Q9BW85 323 aaPredicted RBP15.66■□□□□ 0.1
MSH2-206ENST00000543555 GPCPD1Q9NPB8 672 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 TMEM260Q9NX78 707 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 GOLGA6L9A6NEM1 432 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 ZNF543Q08ER8 600 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 CCDC93Q567U6 631 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 TOGARAM2Q6ZUX3 1019 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 COA7Q96BR5 231 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 ARID3AQ99856 593 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 DBNDD1Q9H9R9 158 aa15.66■□□□□ 0.1
MSH2-206ENST00000543555 RHOBTB3O94955 611 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 HLA-DOAP06340 250 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 TCP11X2Q5H9J9 407 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 MYH8P13535 1937 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 KCNJ18B7U540 433 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 N4BP3O15049 544 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 ADCY7P51828 1080 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 COPB1P53618 953 aaKnown RBP15.65■□□□□ 0.1
MSH2-206ENST00000543555 KCNJ12Q14500 433 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 ANKRD20A12PQ8NF67 263 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 BCS1LQ9Y276 419 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 MFAP3LO75121 409 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 TECP42680 631 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 NFIAQ12857 509 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
MSH2-206ENST00000543555 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
MSH2-206ENST00000543555 NAA15Q9BXJ9 866 aaKnown RBP15.65■□□□□ 0.1
MSH2-206ENST00000543555 SLX4Q8IY92 1834 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 H7C1D1 291 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 CRKP46108 304 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 CPLX3Q8WVH0 158 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 EHD4Q9H223 541 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 VPS16Q9H269 839 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 JMJD4Q9H9V9 463 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 TAB2Q9NYJ8 693 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 PNMA6FA0A0J9YX94 578 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 GYPCP04921 128 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 PPP1R18Q6NYC8 613 aa15.64■□□□□ 0.09
MSH2-206ENST00000543555 TRIM49BA6NDI0 452 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 FANCGO15287 622 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 STIM1Q13586 685 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 CNGA4Q8IV77 575 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 ADGRF4Q8IZF3 695 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 ZDHHC15Q96MV8 337 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 MTMR9Q96QG7 549 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 CGNQ9P2M7 1197 aaKnown RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 SOWAHDA6NJG2 315 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 MPHOSPH10O00566 681 aaKnown RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 CASP14P31944 242 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 MTF1Q14872 753 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 GPATCH4Q5T3I0 446 aaKnown RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 CCDC51Q96ER9 411 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 DESI2Q9BSY9 194 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 TRIM9Q9C026 710 aa15.63■□□□□ 0.09
MSH2-206ENST00000543555 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.63■□□□□ 0.09
MSH2-206ENST00000543555 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.63■□□□□ 0.09
MSH2-206ENST00000543555 V9GYY5 206 aaPredicted RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 GREB1LQ9C091 1923 aaPredicted RBP15.63■□□□□ 0.09
MSH2-206ENST00000543555 PMS1P54277 932 aaKnown RBP15.62■□□□□ 0.09
MSH2-206ENST00000543555 AOC3Q16853 763 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 TTBK2Q6IQ55 1244 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 ZFPM1Q8IX07 1006 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 CCDC17Q96LX7 622 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 SGIP1Q9BQI5 828 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 PSMA7O14818 248 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 PPP1R11O60927 126 aaPredicted RBP15.62■□□□□ 0.09
MSH2-206ENST00000543555 TPM1P09493 284 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 TXKP42681 527 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 FXR1P51114 621 aaKnown RBP eCLIP15.62■□□□□ 0.09
MSH2-206ENST00000543555 CALCRLQ16602 461 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 RIC8AQ9NPQ8 531 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms