RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	ERVK-21	P61565	698 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	GSTO1	P78417	241 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ARHGAP8	P85298	464 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	G3BP1	Q13283	466 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ANGPT1	Q15389	498 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	TIGD5	Q53EQ6	642 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ITPRIP	Q8IWB1	547 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	SIRT2	Q8IXJ6	389 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	FTSJ3	Q8IY81	847 aa	Known RBP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	PANK1	Q8TE04	598 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	EAF2	Q96CJ1	260 aa	Predicted RBP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	MRPL38	Q96DV4	380 aa	Known RBP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	NEUROD6	Q96NK8	337 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	BACH2	Q9BYV9	841 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	HIPK3	Q9H422	1215 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	DNAJC18	Q9H819	358 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	CWC22	Q9HCG8	908 aa	Known RBP	7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ZBTB40	Q9NUA8	1239 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	CLDND1	Q9NY35	253 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	MTUS1	Q9ULD2	1270 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	SSUH2	Q9Y2M2	353 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	NDUFB9	Q9Y6M9	179 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ROBO3	Q96MS0	1386 aa		7.79	□□□□□ -1.16
CIT-213	ENST00000543324	ELP1	O95163	1332 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	TEX15	Q9BXT5	2789 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	TLR3	O15455	904 aa	Known RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	SURF6	O75683	361 aa	Known RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	LDHC	P07864	332 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	PFKM	P08237	780 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	HOXA7	P31268	230 aa	Predicted RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	ICAM3	P32942	547 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	SPP2	Q13103	211 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	RRP1B	Q14684	758 aa	Known RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	CLUL1	Q15846	466 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	PTPN21	Q16825	1174 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	CTC1	Q2NKJ3	1217 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	TCEAL5	Q5H9L2	206 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	SH3D19	Q5HYK7	790 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	PRAMEF19	Q5SWL8	479 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	ASTL	Q6HA08	431 aa	Predicted RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	TMED8	Q6PL24	325 aa	Predicted RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	RPAIN	Q86UA6	219 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	ADAM32	Q8TC27	787 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	PIH1D3	Q9NQM4	214 aa	Known RBP	7.78	□□□□□ -1.16
CIT-213	ENST00000543324	FLT1	P17948	1338 aa		7.78	□□□□□ -1.16
CIT-213	ENST00000543324	DMXL2	Q8TDJ6	3036 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	MYO9A	B2RTY4	2548 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	SPTA1	P02549	2419 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	ARVCF	O00192	962 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	PDE4A	P27815	886 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	ZAP70	P43403	619 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	RRP1	P56182	461 aa	Known RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	LMNB2	Q03252	620 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	DLX2	Q07687	328 aa	Predicted RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	CCSAP	Q6IQ19	270 aa	Predicted RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	TMEFF1	Q8IYR6	380 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	ZNF280C	Q8ND82	737 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	BANK1	Q8NDB2	785 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	SPDYE1	Q8NFV5	336 aa	Predicted RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	PIK3R5	Q8WYR1	880 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	TGS1	Q96RS0	853 aa	Known RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324	PAGR1	Q9BTK6	254 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	CTNNA3	Q9UI47	895 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	HERC5	Q9UII4	1024 aa	Known RBP	7.77	□□□□□ -1.17
CIT-213	ENST00000543324		R4GN57	208 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	PIEZO2	Q9H5I5	2752 aa		7.77	□□□□□ -1.17
CIT-213	ENST00000543324	SCN5A	Q14524	2016 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	ATG2A	Q2TAZ0	1938 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	FAM196B	A6NMK8	535 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	SRRM3	A6NNA2	597 aa	Predicted RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	C1QTNF9B	B2RNN3	333 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	C1QTNF9	P0C862	333 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	PLCG2	P16885	1265 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	CAP2	P40123	477 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	FXR2	P51116	673 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	CLCN5	P51795	746 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	JAG1	P78504	1218 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	PICALM	Q13492	652 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	GSE1	Q14687	1217 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	CCDC158	Q5M9N0	1113 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	TTC39A	Q5SRH9	613 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	GORAB	Q5T7V8	394 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	NAA16	Q6N069	864 aa	Predicted RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	UNQ6494/PRO21346	Q6UXR6	183 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	ERC1	Q8IUD2	1116 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	GPR161	Q8N6U8	529 aa	Known RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	KLHDC9	Q8NEP7	349 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	GLT1D1	Q96MS3	346 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	NOC4L	Q9BVI4	516 aa	Known RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	TBC1D2	Q9BYX2	928 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	DHX36	Q9H2U1	1008 aa	Known RBP	7.76	□□□□□ -1.17
CIT-213	ENST00000543324	SNRK	Q9NRH2	765 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	RAI14	Q9P0K7	980 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	DDX19B	Q9UMR2	479 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	EXOC6B	Q9Y2D4	811 aa		7.76	□□□□□ -1.17
CIT-213	ENST00000543324	ABCA12	Q86UK0	2595 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms