RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CBFA2T2O43439 604 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 CD3EP07766 207 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 GIPRP48546 466 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
XRCC4-206ENST00000542685 EPHB3P54753 998 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 YBX1P67809 324 aaKnown RBP7.9□□□□□ -1.14
XRCC4-206ENST00000542685 SSPNQ14714 243 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 RAB3GAP1Q15042 981 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 PPP2R5EQ16537 467 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 OLFML2BQ68BL8 750 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 ADCY4Q8NFM4 1077 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 RASGRP4Q8TDF6 673 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
XRCC4-206ENST00000542685 FCRL3Q96P31 734 aaPredicted RBP7.9□□□□□ -1.14
XRCC4-206ENST00000542685 HAUS7Q99871 368 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 ACSL6Q9UKU0 697 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 KCTD3Q9Y597 815 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 SLC12A7Q9Y666 1083 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQH9 124 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 UNCXA6NJT0 531 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 ABLIM1O14639 778 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 IFNGR1P15260 489 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 ZNF385BQ569K4 471 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 CPLX3Q8WVH0 158 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 CNTD2Q9H8S5 307 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 IRAK3Q9Y616 596 aa7.89□□□□□ -1.15
XRCC4-206ENST00000542685 FGF10O15520 208 aaPredicted RBP7.88□□□□□ -1.15
XRCC4-206ENST00000542685 POU4F1Q01851 419 aa7.88□□□□□ -1.15
XRCC4-206ENST00000542685 MVKQ03426 396 aa7.88□□□□□ -1.15
XRCC4-206ENST00000542685 HEATR6Q6AI08 1181 aaKnown RBP7.88□□□□□ -1.15
XRCC4-206ENST00000542685 TMC6Q7Z403 805 aa7.88□□□□□ -1.15
XRCC4-206ENST00000542685 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
XRCC4-206ENST00000542685 OR6P1Q8NGX9 317 aa7.88□□□□□ -1.15
XRCC4-206ENST00000542685 SIGLEC10Q96LC7 697 aa7.88□□□□□ -1.15
XRCC4-206ENST00000542685 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
XRCC4-206ENST00000542685 CEP164Q9UPV0 1460 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 RFXAPO00287 272 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 PI3P19957 117 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 GJA8P48165 433 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 SLC7A5Q01650 507 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 CYP2R1Q6VVX0 501 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
XRCC4-206ENST00000542685 PANK1Q8TE04 598 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 FGD4Q96M96 766 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 TNFRSF12AQ9NP84 129 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 WHRNQ9P202 907 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 DIS3Q9Y2L1 958 aaKnown RBP7.87□□□□□ -1.15
XRCC4-206ENST00000542685 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
XRCC4-206ENST00000542685 A0A087WZG4 1122 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 A0A1W2PQJ5 194 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 N4BP3O15049 544 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 EPHX1P07099 455 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 TMEM62Q0P6H9 643 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 RPTNQ6XPR3 784 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 SHDQ96IW2 340 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 PTCHD1Q96NR3 888 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 KLHL25Q9H0H3 589 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 GBP3Q9H0R5 595 aa7.86□□□□□ -1.15
XRCC4-206ENST00000542685 ABCC8Q09428 1581 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 TBC1D8O95759 1140 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 CDR1P51861 262 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 TCERG1LQ5VWI1 586 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 MZB1Q8WU39 189 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 INPP5FQ9Y2H2 1132 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 UNC13AQ9UPW8 1703 aa7.85□□□□□ -1.15
XRCC4-206ENST00000542685 STXBP3O00186 592 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 VAMP4O75379 141 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 PPM1BO75688 479 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 INHBBP09529 407 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 NCKAP1LP55160 1127 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 DPY19L1Q2PZI1 675 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 BICRALQ6AI39 1079 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 LDHDQ86WU2 507 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 KLHL6Q8WZ60 621 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 TGIF2Q9GZN2 237 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 CCSER2Q9H7U1 834 aa7.84□□□□□ -1.15
XRCC4-206ENST00000542685 BMP7P18075 431 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 TACR1P25103 407 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 PLEKHN1Q494U1 663 aaPredicted RBP7.83□□□□□ -1.16
XRCC4-206ENST00000542685 TTLL10Q6ZVT0 673 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 SEC16BQ96JE7 1060 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 MCMBPQ9BTE3 642 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 PDLIM7Q9NR12 457 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 SUGT1Q9Y2Z0 365 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 VPS8Q8N3P4 1428 aa7.83□□□□□ -1.16
XRCC4-206ENST00000542685 CUX2O14529 1486 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 L1CAMP32004 1257 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 CBX2Q14781 532 aaPredicted RBP7.82□□□□□ -1.16
XRCC4-206ENST00000542685 NR1I3Q14994 352 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 KIAA1211LQ6NV74 962 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 ZC3H14Q6PJT7 736 aaKnown RBP7.82□□□□□ -1.16
XRCC4-206ENST00000542685 IGDCC3Q8IVU1 814 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 TMEM151BQ8IW70 566 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 FAM169BQ8N8A8 192 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms