RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 RIOX1Q9H6W3 641 aa14.21□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 LOC285556D6RIA3 1793 aa14.21□□□□□ -0.13
CACNA1C-IT3-201ENST00000542680 SYT1P21579 422 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SH3D19Q5HYK7 790 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FAM160B2Q86V87 743 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 STAG2Q8N3U4 1231 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MYLIPQ8WY64 445 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PHKBQ93100 1093 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PAK6Q9NQU5 681 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 AFG3L2Q9Y4W6 797 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ZHX2Q9Y6X8 837 aa14.2□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CXCL11O14625 94 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 BRD1O95696 1058 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SCG2P13521 617 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 STAT2P52630 851 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PRKCZQ05513 592 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TRAF1Q13077 416 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PPIL2Q13356 520 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TRIM29Q14134 588 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TEX2Q8IWB9 1127 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CHURC1Q8WUH1 139 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 RRP36Q96EU6 259 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ALG1Q9BT22 464 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SH3GLB2Q9NR46 395 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SEC63Q9UGP8 760 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FEM1BQ9UK73 627 aa14.19□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 H3BQV1 296 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CYTH3O43739 400 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 GOLGA8HP0CJ92 632 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FDX1P10109 184 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SPP2Q13103 211 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MTMR2Q13614 643 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SEMA6BQ9H3T3 888 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MTMR7Q9Y216 660 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 BTBD19C9JJ37 291 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 INHAP05111 366 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ZSCAN22P10073 491 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PKN1Q16512 942 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CMTR1Q8N1G2 835 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MTMR6Q9Y217 621 aa14.17□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 BAZ2BQ9UIF8 2168 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PNMA6FA0A0J9YX94 578 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ZBTB5O15062 677 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 RAD21O60216 631 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 VCAM1P19320 739 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SLC35G1Q2M3R5 365 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FAM83BQ5T0W9 1011 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SYDE2Q5VT97 1194 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CCDC84Q86UT8 332 aaPredicted RBP14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ADGRF4Q8IZF3 695 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CCDC82Q8N4S0 544 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 JMJD4Q9H9V9 463 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 EMILIN3Q9NT22 766 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CPA4Q9UI42 421 aa14.16□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 A0A0G2JLL6 359 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ESYT2A0FGR8 921 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 CETPP11597 493 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 FOSL2P15408 326 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SAFBQ15424 915 aaKnown RBP eCLIP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 PRRT2Q7Z6L0 340 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 SPICE1Q8N0Z3 855 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 USP38Q8NB14 1042 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 BRMS1Q9HCU9 246 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 ISY1Q9ULR0 285 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-IT3-201ENST00000542680 MYH15Q9Y2K3 1946 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ADCY3O60266 1144 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 F13A1P00488 732 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 MMP1P03956 469 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ELNP15502 786 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 CALML3P27482 149 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HMGCS2P54868 508 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms