RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 DYNC1LI2O43237 492 aaPredicted RBP21.4■■□□□ 1.02
RAP1B-228ENST00000542145 SMPD1P17405 629 aa21.4■■□□□ 1.02
RAP1B-228ENST00000542145 HOXD11P31277 338 aaPredicted RBP21.4■■□□□ 1.02
RAP1B-228ENST00000542145 TMEM63BQ5T3F8 832 aa21.4■■□□□ 1.02
RAP1B-228ENST00000542145 RPUSD2Q8IZ73 545 aaKnown RBP21.4■■□□□ 1.02
RAP1B-228ENST00000542145 AGBL1Q96MI9 1066 aa21.4■■□□□ 1.02
RAP1B-228ENST00000542145 AP5M1Q9H0R1 490 aa21.4■■□□□ 1.02
RAP1B-228ENST00000542145 PDGFCQ9NRA1 345 aa21.4■■□□□ 1.02
RAP1B-228ENST00000542145 ZBBXA8MT70 800 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 ERC2O15083 957 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 RAB11FIP3O75154 756 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 SKIV2LQ15477 1246 aaKnown RBP21.39■■□□□ 1.01
RAP1B-228ENST00000542145 AAK1Q2M2I8 961 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 ZSCAN25Q6NSZ9 544 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 RPAP2Q8IXW5 612 aaPredicted RBP21.39■■□□□ 1.01
RAP1B-228ENST00000542145 CEP95Q96GE4 821 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 ACAD9Q9H845 621 aa21.39■■□□□ 1.01
RAP1B-228ENST00000542145 A1CFQ9NQ94 594 aaKnown RBP21.39■■□□□ 1.01
RAP1B-228ENST00000542145 ASB14A6NK59 587 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 ATP2A2P16615 1042 aaKnown RBP21.38■■□□□ 1.01
RAP1B-228ENST00000542145 POU3F3P20264 500 aaPredicted RBP21.38■■□□□ 1.01
RAP1B-228ENST00000542145 TTLL4Q14679 1199 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 LRRC47Q8N1G4 583 aaKnown RBP21.38■■□□□ 1.01
RAP1B-228ENST00000542145 SEZ6LQ9BYH1 1024 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 EPHX3Q9H6B9 360 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 MTMR4Q9NYA4 1195 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 MTCH2Q9Y6C9 303 aa21.38■■□□□ 1.01
RAP1B-228ENST00000542145 ZNF536O15090 1300 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 PRDM1O75626 825 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 BMP3P12645 472 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 SLFN13Q68D06 897 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 TAPT1Q6NXT6 567 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
RAP1B-228ENST00000542145 GMCL1P1Q8NEA9 526 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 LRFN3Q9BTN0 628 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 CERS4Q9HA82 394 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 RNF146Q9NTX7 359 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 TET1Q8NFU7 2136 aa21.37■■□□□ 1.01
RAP1B-228ENST00000542145 TMEM232C9JQI7 657 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 ZEB2O60315 1214 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 HMMRO75330 724 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 CA3P07451 260 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 KRT40Q6A162 431 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 IQSEC1Q6DN90 963 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 EEPD1Q7L9B9 569 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 ALDH8A1Q9H2A2 487 aaPredicted RBP21.36■■□□□ 1.01
RAP1B-228ENST00000542145 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
RAP1B-228ENST00000542145 TRIP12Q14669 1992 aaPredicted RBP21.36■■□□□ 1.01
RAP1B-228ENST00000542145 EPOPA6NHQ4 379 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 TTLL1O95922 423 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 FDX1P10109 184 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 FBXO16Q8IX29 292 aaPredicted RBP21.35■■□□□ 1.01
RAP1B-228ENST00000542145 OSBP2Q969R2 916 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 EPB41L4AQ9HCS5 686 aaPredicted RBP21.35■■□□□ 1.01
RAP1B-228ENST00000542145 SYNPO2Q9UMS6 1093 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 Q9Y3F1 56 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 BRWD1Q9NSI6 2320 aa21.35■■□□□ 1.01
RAP1B-228ENST00000542145 CYP2C9P11712 490 aa21.34■■□□□ 1.01
RAP1B-228ENST00000542145 DEFB128Q7Z7B8 93 aa21.34■■□□□ 1.01
RAP1B-228ENST00000542145 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
RAP1B-228ENST00000542145 TRERF1Q96PN7 1200 aa21.34■■□□□ 1.01
RAP1B-228ENST00000542145 TRMT13Q9NUP7 481 aaKnown RBP21.34■■□□□ 1.01
RAP1B-228ENST00000542145 PTPRSQ13332 1948 aa21.33■■□□□ 1.01
RAP1B-228ENST00000542145 GTPBP6O43824 516 aaPredicted RBP21.33■■□□□ 1.01
RAP1B-228ENST00000542145 TLL1O43897 1013 aa21.33■■□□□ 1.01
RAP1B-228ENST00000542145 ALAS1P13196 640 aa21.33■■□□□ 1.01
RAP1B-228ENST00000542145 STAT2P52630 851 aa21.33■■□□□ 1.01
RAP1B-228ENST00000542145 MUM1L1Q5H9M0 696 aa21.33■■□□□ 1.01
RAP1B-228ENST00000542145 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1.01
RAP1B-228ENST00000542145 ARHGEF15O94989 841 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 PFKMP08237 780 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 SNAP25P60880 206 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 TKFCQ3LXA3 575 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 CHURC1Q8WUH1 139 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 STAG1Q8WVM7 1258 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 PURBQ96QR8 312 aaKnown RBP21.32■■□□□ 1
RAP1B-228ENST00000542145 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 CYP39A1Q9NYL5 469 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 COG5Q9UP83 839 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 ARIH1Q9Y4X5 557 aaPredicted RBP21.32■■□□□ 1
RAP1B-228ENST00000542145 SCN10AQ9Y5Y9 1956 aa21.32■■□□□ 1
RAP1B-228ENST00000542145 TNKSO95271 1327 aa21.31■■□□□ 1
RAP1B-228ENST00000542145 TDO2P48775 406 aa21.31■■□□□ 1
RAP1B-228ENST00000542145 IKQ13123 557 aaPredicted RBP21.31■■□□□ 1
RAP1B-228ENST00000542145 FAM160B2Q86V87 743 aa21.31■■□□□ 1
RAP1B-228ENST00000542145 NEDD1Q8NHV4 660 aa21.31■■□□□ 1
RAP1B-228ENST00000542145 ZNF287Q9HBT7 754 aa21.31■■□□□ 1
RAP1B-228ENST00000542145 SMARCA5O60264 1052 aaPredicted RBP21.3■■□□□ 1
RAP1B-228ENST00000542145 SUPT20HL2P0C7V6 817 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 MCCP23508 829 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 TAP1Q03518 808 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 MORC4Q8TE76 937 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 ARNTL2Q8WYA1 636 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 APPBP2Q92624 585 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 KHSRPQ92945 711 aaKnown RBP eCLIP21.3■■□□□ 14e-8■■■□□ 17
RAP1B-228ENST00000542145 VTA1Q9NP79 307 aa21.3■■□□□ 1
RAP1B-228ENST00000542145 PLIN4Q96Q06 1357 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms