RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TMEM253P0C7T8 217 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 IFNGR1P15260 489 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 PDE6BP35913 854 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 NFKB2Q00653 900 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 MVKQ03426 396 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 LAPTM5Q13571 262 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 ADGRF1Q5T601 910 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 HLA-DQA1Q5Y7H0 255 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 HEATR6Q6AI08 1181 aaKnown RBP5.94□□□□□ -1.46
LEMD3-204ENST00000542032 CIAPIN1Q6FI81 312 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 ATG14Q6ZNE5 492 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 PRRT2Q7Z6L0 340 aaPredicted RBP5.94□□□□□ -1.46
LEMD3-204ENST00000542032 CPLX3Q8WVH0 158 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 KCNN1Q92952 543 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 TINF2Q9BSI4 451 aa5.94□□□□□ -1.46
LEMD3-204ENST00000542032 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
LEMD3-204ENST00000542032 AURKAO14965 403 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 PRKCAP17252 672 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 DLG4P78352 724 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 GRB10Q13322 594 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 CBX2Q14781 532 aaPredicted RBP5.93□□□□□ -1.46
LEMD3-204ENST00000542032 KCNA10Q16322 511 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 PPP2R5EQ16537 467 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 RCSD1Q6JBY9 416 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 VHLLQ6RSH7 139 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 NLGN2Q8NFZ4 835 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 ZDHHC15Q96MV8 337 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 KLHL14Q9P2G3 628 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 IMPACTQ9P2X3 320 aa5.93□□□□□ -1.46
LEMD3-204ENST00000542032 CGGBP1Q9UFW8 167 aaPredicted RBP5.93□□□□□ -1.46
LEMD3-204ENST00000542032 MBD1Q9UIS9 605 aaPredicted RBP5.93□□□□□ -1.46
LEMD3-204ENST00000542032 CD3EP07766 207 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 FGRP09769 529 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 MSL3P1P0C860 447 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 ZNF143P52747 638 aaPredicted RBP5.92□□□□□ -1.46
LEMD3-204ENST00000542032 CORO7P57737 925 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 KIAA1211LQ6NV74 962 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 NUP43Q8NFH3 380 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 ADCY4Q8NFM4 1077 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 ANAPC16Q96DE5 110 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 FGD4Q96M96 766 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 PTCHD1Q96NR3 888 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 CAPN10Q9HC96 672 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 PARD6AQ9NPB6 346 aa5.92□□□□□ -1.46
LEMD3-204ENST00000542032 ANKRD34BA5PLL1 514 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 TCAF2A6NFQ2 919 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 OVOL3O00110 214 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 PPM1BO75688 479 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 VIPR1P32241 457 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 CYP4F8P98187 520 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 PPP2R5DQ14738 602 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 VPS37DQ86XT2 251 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 NAT16Q8N8M0 369 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 APEX2Q9UBZ4 518 aa5.91□□□□□ -1.46
LEMD3-204ENST00000542032 ABLIM1O14639 778 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 VAMP4O75379 141 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 MPOP05164 745 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 SDHBP21912 280 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 ARL4AP40617 200 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 RANGAP1P46060 587 aaPredicted RBP5.9□□□□□ -1.46
LEMD3-204ENST00000542032 LINC00310P59036 64 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 NCAPHQ15003 741 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 ADAT2Q7Z6V5 191 aaKnown RBP5.9□□□□□ -1.46
LEMD3-204ENST00000542032 GMLQ99445 158 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 SGPP1Q9BX95 441 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 CNTD2Q9H8S5 307 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 EMC9Q9Y3B6 208 aa5.9□□□□□ -1.46
LEMD3-204ENST00000542032 SMAD7O15105 426 aaKnown RBP5.89□□□□□ -1.47
LEMD3-204ENST00000542032 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 TBC1D8O95759 1140 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 ETFBP38117 255 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 SRSF3P84103 164 aaKnown RBP5.89□□□□□ -1.47
LEMD3-204ENST00000542032 AMPD2Q01433 879 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 SLC43A3Q8NBI5 491 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 COPS5Q92905 334 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 BORCS6Q96GS4 357 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 ZCCHC4Q9H5U6 513 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 PRKAG3Q9UGI9 489 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 BACE2Q9Y5Z0 518 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 MRVI1Q9Y6F6 885 aa5.89□□□□□ -1.47
LEMD3-204ENST00000542032 STXBP3O00186 592 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 IRS4O14654 1257 aaPredicted RBP5.88□□□□□ -1.47
LEMD3-204ENST00000542032 N4BP3O15049 544 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 SSBP05455 408 aaKnown RBP eCLIP5.88□□□□□ -1.47
LEMD3-204ENST00000542032 L1CAMP32004 1257 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 GNL2Q13823 731 aaKnown RBP5.88□□□□□ -1.47
LEMD3-204ENST00000542032 RPTNQ6XPR3 784 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 MCF2L2Q86YR7 1114 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 BVESQ8NE79 360 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 APBA2Q99767 749 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 PDLIM7Q9NR12 457 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 ACTR10Q9NZ32 417 aa5.88□□□□□ -1.47
LEMD3-204ENST00000542032 C2orf71A6NGG8 1288 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 NUAK1O60285 661 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 DBHP09172 617 aa5.87□□□□□ -1.47
LEMD3-204ENST00000542032 MAPKAPK2P49137 400 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms