RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 TMTC2Q8N394 836 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 CSRNP2Q9H175 543 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 PPANQ9NQ55 473 aaKnown RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 OPA1O60313 960 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 SKAP2O75563 359 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 TSPY3P0CV98 308 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 TSPY8P0CW00 308 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 IFNAR1P17181 557 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 MSL3Q8N5Y2 521 aaKnown RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 IFT81Q8WYA0 676 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
PDCD2-208ENST00000541970 ABCC6O95255 1503 aa18.63■□□□□ 0.57
PDCD2-208ENST00000541970 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 MMP1P03956 469 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 LIFRP42702 1097 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 AMPD2Q01433 879 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 KRT31Q15323 416 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 BACH1O14867 736 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 CHUKO15111 745 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
PDCD2-208ENST00000541970 MEFVO15553 781 aaPredicted RBP18.62■□□□□ 0.57
PDCD2-208ENST00000541970 NTRK3Q16288 839 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 DMGDHQ9UI17 866 aaKnown RBP18.62■□□□□ 0.57
PDCD2-208ENST00000541970 DUSP10Q9Y6W6 482 aa18.62■□□□□ 0.57
PDCD2-208ENST00000541970 E7EVH7 732 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 PDE2AO00408 941 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 KRT2P35908 639 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 PRPF38AQ8NAV1 312 aaKnown RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 SMCR8Q8TEV9 937 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 STAG1Q8WVM7 1258 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 KLC4Q9NSK0 619 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 GBP2P32456 591 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 CCDC40Q4G0X9 1142 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 LRRC1Q9BTT6 524 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 FAM184BQ9ULE4 1060 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 VEGFAP15692 232 aaPredicted RBP18.61■□□□□ 0.57
PDCD2-208ENST00000541970 GUCY2FP51841 1108 aa18.61■□□□□ 0.57
PDCD2-208ENST00000541970 SATB1Q01826 763 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 NNTQ13423 1086 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PDCD2-208ENST00000541970 BCCIPQ9P287 314 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDCD2-208ENST00000541970 LUC7L2Q9Y383 392 aaKnown RBP18.6■□□□□ 0.57
PDCD2-208ENST00000541970 KRT86O43790 486 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
PDCD2-208ENST00000541970 PDHBP11177 359 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 ERCC5P28715 1186 aaPredicted RBP18.6■□□□□ 0.57
PDCD2-208ENST00000541970 CCDC96Q2M329 555 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 RILPL1Q5EBL4 403 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 MAATS1Q7Z4T9 603 aa18.6■□□□□ 0.57
PDCD2-208ENST00000541970 GOLGA8KD6RF30 607 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 PEX19P40855 299 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 SGMS1Q86VZ5 419 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 GRIN2DO15399 1336 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 ESYT3A0FGR9 886 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 SHOX2O60902 331 aaPredicted RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 RNASE9P60153 205 aaKnown RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 EARS2Q5JPH6 523 aaKnown RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 TBC1D31Q96DN5 1066 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 COPB1P53618 953 aaKnown RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 IQCEQ6IPM2 695 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 HAUS4Q9H6D7 363 aa18.59■□□□□ 0.57
PDCD2-208ENST00000541970 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
PDCD2-208ENST00000541970 CCDC121Q6ZUS5 278 aa18.58■□□□□ 0.57
PDCD2-208ENST00000541970 TSEN2Q8NCE0 465 aaKnown RBP18.58■□□□□ 0.57
PDCD2-208ENST00000541970 CCDC51Q96ER9 411 aa18.58■□□□□ 0.57
PDCD2-208ENST00000541970 CEP131Q9UPN4 1083 aa18.58■□□□□ 0.57
PDCD2-208ENST00000541970 PARP4Q9UKK3 1724 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 TTC26A0AVF1 554 aa18.58■□□□□ 0.56
PDCD2-208ENST00000541970 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 MARCH6O60337 910 aa18.58■□□□□ 0.56
PDCD2-208ENST00000541970 ERCC3P19447 782 aa18.58■□□□□ 0.56
PDCD2-208ENST00000541970 RBM5P52756 815 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 CFAP58Q5T655 872 aa18.58■□□□□ 0.56
PDCD2-208ENST00000541970 KANK3Q6NY19 840 aa18.58■□□□□ 0.56
PDCD2-208ENST00000541970 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 NSUN4Q96CB9 384 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 CCDC43Q96MW1 224 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 TRIM21P19474 475 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 HDLBPQ00341 1268 aaKnown RBP18.58■□□□□ 0.56
PDCD2-208ENST00000541970 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms