RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TRIM22Q8IYM9 498 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
DDX55-208ENST00000541259 COA7Q96BR5 231 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 RRP36Q96EU6 259 aaKnown RBP10.8□□□□□ -0.68
DDX55-208ENST00000541259 CAPNS2Q96L46 248 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 ALG1Q9BT22 464 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
DDX55-208ENST00000541259 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 ADAMTS5Q9UNA0 930 aa10.8□□□□□ -0.68
DDX55-208ENST00000541259 DOCK3Q8IZD9 2030 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 VWA5AO00534 786 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 ZBTB5O15062 677 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 DEXIO95424 95 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 CYP2C8P10632 490 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 SCG2P13521 617 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 VEGFBP49765 207 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
DDX55-208ENST00000541259 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
DDX55-208ENST00000541259 GUCY1B3Q02153 619 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 WWC2Q6AWC2 1192 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 ANKRD23Q86SG2 305 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 FAM184AQ8NB25 1140 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 REPS2Q8NFH8 660 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 SLC38A10Q9HBR0 1119 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 VPS54Q9P1Q0 977 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 TCHHQ07283 1943 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 ZNF536O15090 1300 aa10.79□□□□□ -0.68
DDX55-208ENST00000541259 STXBP3O00186 592 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 ADAMTS3O15072 1205 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 ZBED4O75132 1171 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 CNMDO75829 334 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 OSBPP22059 807 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 DDIT3P35638 169 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 C1QTNF8P60827 252 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 HERVK_113P62684 666 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 PABPC4Q13310 644 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDX55-208ENST00000541259 LARP1BQ659C4 914 aaKnown RBP10.78□□□□□ -0.68
DDX55-208ENST00000541259 HEATR3Q7Z4Q2 680 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
DDX55-208ENST00000541259 BTBD7Q9P203 1132 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 SEC63Q9UGP8 760 aaKnown RBP10.78□□□□□ -0.68
DDX55-208ENST00000541259 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
DDX55-208ENST00000541259 MYH15Q9Y2K3 1946 aa10.78□□□□□ -0.68
DDX55-208ENST00000541259 SYT1P21579 422 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 TM4SF4P48230 202 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 PKP1Q13835 747 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 TMEM132BQ14DG7 1078 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 USH1GQ495M9 461 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 FBXO11Q86XK2 927 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 WASF1Q92558 559 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 CWC22Q9HCG8 908 aaKnown RBP10.77□□□□□ -0.69
DDX55-208ENST00000541259 TXNRD2Q9NNW7 524 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 BARHL2Q9NY43 387 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
DDX55-208ENST00000541259 RBPJLQ9UBG7 517 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 SLC45A1Q9Y2W3 748 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 MYPNQ86TC9 1320 aa10.77□□□□□ -0.69
DDX55-208ENST00000541259 RBBP6Q7Z6E9 1792 aaKnown RBP10.77□□□□□ -0.69
DDX55-208ENST00000541259 MYH7BA7E2Y1 1941 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 ICAM1P05362 532 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 NAPAP54920 295 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 INHBEP58166 350 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 SREBF2Q12772 1141 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 NOGQ13253 232 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 PLS1Q14651 629 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 Q3C1V9 767 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 KRT40Q6A162 431 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 LBX2Q6XYB7 198 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 C8orf76Q96K31 380 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 AMNQ9BXJ7 453 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 R3HDMLQ9H3Y0 253 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 PNMA3Q9UL41 463 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 ZNF214Q9UL59 606 aaPredicted RBP10.76□□□□□ -0.69
DDX55-208ENST00000541259 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 ZDHHC9Q9Y397 364 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 RIPK3Q9Y572 518 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 CTDP1Q9Y5B0 961 aaPredicted RBP10.76□□□□□ -0.69
DDX55-208ENST00000541259 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 MGAMO43451 1857 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 LCTP09848 1927 aa10.76□□□□□ -0.69
DDX55-208ENST00000541259 PLXNB2O15031 1838 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 VPS37CA5D8V6 355 aaPredicted RBP10.75□□□□□ -0.69
DDX55-208ENST00000541259 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
DDX55-208ENST00000541259 OPLAHO14841 1288 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 STX6O43752 255 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 FDX1P10109 184 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 ALAS1P13196 640 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 HSPA6P17066 643 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 TAF1CQ15572 869 aaPredicted RBP10.75□□□□□ -0.69
DDX55-208ENST00000541259 NPY5RQ15761 445 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
DDX55-208ENST00000541259 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms