RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ZNF579Q8NAF0 562 aaKnown RBP27.96■■■□□ 2.07
TTC3-225ENST00000540756 KIAA1683Q9H0B3 1180 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.96■■■□□ 2.07
TTC3-225ENST00000540756 HOOK2Q96ED9 719 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 SDF4Q9BRK5 362 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 EMILIN3Q9NT22 766 aa27.96■■■□□ 2.07
TTC3-225ENST00000540756 CCNT1O60563 726 aaKnown RBP27.95■■■□□ 2.06
TTC3-225ENST00000540756 USP2O75604 605 aaPredicted RBP27.95■■■□□ 2.06
TTC3-225ENST00000540756 SUPT20HL1Q3ZLR7 823 aa27.95■■■□□ 2.06
TTC3-225ENST00000540756 NEK8Q86SG6 692 aa27.95■■■□□ 2.06
TTC3-225ENST00000540756 P2RX7Q99572 595 aaKnown RBP27.95■■■□□ 2.06
TTC3-225ENST00000540756 MYH7BA7E2Y1 1941 aa27.95■■■□□ 2.06
TTC3-225ENST00000540756 OPLAHO14841 1288 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 EPHX2P34913 555 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 MRPL12P52815 198 aaKnown RBP27.94■■■□□ 2.06
TTC3-225ENST00000540756 LONRF3Q496Y0 759 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 SULF1Q8IWU6 871 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 CHURC1Q8WUH1 139 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 FERMT2Q96AC1 680 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 GINM1Q9NU53 330 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 GLTPD2A6NH11 291 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 TYRO3Q06418 890 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 PHIPQ8WWQ0 1821 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 PICK1Q9NRD5 415 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 ZHX2Q9Y6X8 837 aa27.94■■■□□ 2.06
TTC3-225ENST00000540756 MEIS2O14770 477 aa27.93■■■□□ 2.06
TTC3-225ENST00000540756 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
TTC3-225ENST00000540756 PDILTQ8N807 584 aa27.93■■■□□ 2.06
TTC3-225ENST00000540756 SYMPKQ92797 1274 aaKnown RBP27.93■■■□□ 2.06
TTC3-225ENST00000540756 RANBP17Q9H2T7 1088 aaKnown RBP27.93■■■□□ 2.06
TTC3-225ENST00000540756 FEM1BQ9UK73 627 aa27.93■■■□□ 2.06
TTC3-225ENST00000540756 A0A087X0B3 334 aa27.92■■■□□ 2.06
TTC3-225ENST00000540756 CCDC192P0DO97 292 aa27.92■■■□□ 2.06
TTC3-225ENST00000540756 POLR2DO15514 142 aaKnown RBP27.92■■■□□ 2.06
TTC3-225ENST00000540756 VCAM1P19320 739 aa27.92■■■□□ 2.06
TTC3-225ENST00000540756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.92■■■□□ 2.061e-9■□□□□ 8.5
TTC3-225ENST00000540756 FAM13BQ9NYF5 915 aa27.92■■■□□ 2.06
TTC3-225ENST00000540756 POTECB2RU33 542 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 PLA2G6O60733 806 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 WDR46O15213 610 aaKnown RBP27.91■■■□□ 2.06
TTC3-225ENST00000540756 CTAGE5O15320 804 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 GRIN3BO60391 1043 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 TDP2O95551 362 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 CDC25AP30304 524 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 BACE1P56817 501 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 FAM160B2Q86V87 743 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 ZNF280CQ8ND82 737 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 LPAR1Q92633 364 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 WDR18Q9BV38 432 aa27.91■■■□□ 2.06
TTC3-225ENST00000540756 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.9■■■□□ 2.06
TTC3-225ENST00000540756 FOXN1O15353 648 aa27.89■■■□□ 2.06
TTC3-225ENST00000540756 HOXA13P31271 388 aaPredicted RBP27.89■■■□□ 2.06
TTC3-225ENST00000540756 ARL6IP4Q66PJ3 421 aaKnown RBP27.89■■■□□ 2.06
TTC3-225ENST00000540756 USP50Q70EL3 339 aaPredicted RBP27.89■■■□□ 2.06
TTC3-225ENST00000540756 POTEDQ86YR6 584 aa27.89■■■□□ 2.06
TTC3-225ENST00000540756 TBC1D5Q92609 795 aa27.89■■■□□ 2.06
TTC3-225ENST00000540756 TANGO6Q9C0B7 1094 aa27.89■■■□□ 2.06
TTC3-225ENST00000540756 SLC37A4O43826 429 aa27.89■■■□□ 2.05
TTC3-225ENST00000540756 EAPPQ56P03 285 aaPredicted RBP27.89■■■□□ 2.05
TTC3-225ENST00000540756 SASS6Q6UVJ0 657 aa27.89■■■□□ 2.05
TTC3-225ENST00000540756 KRBA2Q6ZNG9 492 aa27.89■■■□□ 2.05
TTC3-225ENST00000540756 TIGD1Q96MW7 591 aa27.89■■■□□ 2.05
TTC3-225ENST00000540756 HMGCS2P54868 508 aa27.88■■■□□ 2.05
TTC3-225ENST00000540756 VGLL4Q14135 290 aa27.88■■■□□ 2.05
TTC3-225ENST00000540756 RPAP3Q9H6T3 665 aaPredicted RBP27.88■■■□□ 2.05
TTC3-225ENST00000540756 SERTAD1Q9UHV2 236 aa27.88■■■□□ 2.05
TTC3-225ENST00000540756 NEMFO60524 1076 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 ANO6Q4KMQ2 910 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 MOB2Q70IA6 237 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 CNKSR2Q8WXI2 1034 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 AGBL1Q96MI9 1066 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 SLF1Q9BQI6 1058 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 TAF1DQ9H5J8 278 aaPredicted RBP27.87■■■□□ 2.05
TTC3-225ENST00000540756 OTOFQ9HC10 1997 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 PP2D1A8MPX8 630 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 CNNM3Q8NE01 707 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 AS3MTQ9HBK9 375 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 KIAA1468Q9P260 1216 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 SNCAIPQ9Y6H5 919 aa27.87■■■□□ 2.05
TTC3-225ENST00000540756 ZNF536O15090 1300 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 FLOT1O75955 427 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 PNOCQ13519 176 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 NOL9Q5SY16 702 aaKnown RBP27.86■■■□□ 2.05
TTC3-225ENST00000540756 DTHD1Q6ZMT9 781 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 GRAMD1CQ8IYS0 662 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 ANO3Q9BYT9 981 aa27.86■■■□□ 2.05
TTC3-225ENST00000540756 LDHDQ86WU2 507 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 PRPF38AQ8NAV1 312 aaKnown RBP27.85■■■□□ 2.05
TTC3-225ENST00000540756 DHX58Q96C10 678 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 ACTN4O43707 911 aaKnown RBP27.85■■■□□ 2.05
TTC3-225ENST00000540756 OR52Z1P0C646 297 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 USP14P54578 494 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 CDCA5Q96FF9 252 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 WNK4Q96J92 1243 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 GLT8D2Q9H1C3 349 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 DNAJC25Q9H1X3 360 aa27.85■■■□□ 2.05
TTC3-225ENST00000540756 POTEIP0CG38 1075 aa27.84■■■□□ 2.05
TTC3-225ENST00000540756 POTEJP0CG39 1038 aa27.84■■■□□ 2.05
TTC3-225ENST00000540756 MAP3K9P80192 1104 aa27.84■■■□□ 2.05
TTC3-225ENST00000540756 AFG3L2Q9Y4W6 797 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms