RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 MROH8Q9H579 483 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 RIOX1Q9H6W3 641 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 GJD2Q9UKL4 321 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
ATL3-204ENST00000540699 NAP1L2Q9ULW6 460 aaPredicted RBP12.26□□□□□ -0.45
ATL3-204ENST00000540699 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 LCTP09848 1927 aa12.26□□□□□ -0.45
ATL3-204ENST00000540699 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
ATL3-204ENST00000540699 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 CYTH3O43739 400 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 PDIA4P13667 645 aaKnown RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 RXRAP19793 462 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 PDCP20941 246 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 KIF5BP33176 963 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 ADD1P35611 737 aaKnown RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 GPR142Q7Z601 462 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 PLEKHH3Q7Z736 793 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 ADGRF4Q8IZF3 695 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 CTCFLQ8NI51 663 aaPredicted RBP12.25□□□□□ -0.45
ATL3-204ENST00000540699 USP6NLQ92738 828 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 LZTS2Q9BRK4 669 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 SPZ1Q9BXG8 430 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 UBA5Q9GZZ9 404 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 CPVLQ9H3G5 476 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 SRRDQ9UH36 339 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
ATL3-204ENST00000540699 STRNO43815 780 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 ICAM1P05362 532 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 ZSCAN22P10073 491 aaPredicted RBP12.24□□□□□ -0.45
ATL3-204ENST00000540699 ERCC3P19447 782 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 PTPREP23469 700 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 HOXD10P28358 340 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 GNAQP50148 359 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 IRF5Q13568 498 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 GRB14Q14449 540 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 PLS1Q14651 629 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 RTN1Q16799 776 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 TKFCQ3LXA3 575 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 MORN1Q5T089 497 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 SNRNP48Q6IEG0 339 aaKnown RBP12.24□□□□□ -0.45
ATL3-204ENST00000540699 SYNE3Q6ZMZ3 975 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 TMTC3Q6ZXV5 915 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 ABRAQ8N0Z2 381 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 COA7Q96BR5 231 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 DDX11Q96FC9 970 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 RAVER2Q9HCJ3 691 aaKnown RBP12.24□□□□□ -0.45
ATL3-204ENST00000540699 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 RIPK3Q9Y572 518 aa12.24□□□□□ -0.45
ATL3-204ENST00000540699 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 ECM2O94769 699 aaPredicted RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 HOXC6P09630 235 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 IFNAR1P17181 557 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 MCM4P33991 863 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 SNAP25P60880 206 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 FUT2Q10981 343 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 LARP1BQ659C4 914 aaKnown RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 GABRQQ9UN88 632 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 CTDP1Q9Y5B0 961 aaPredicted RBP12.23□□□□□ -0.45
ATL3-204ENST00000540699 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 MCM3APO60318 1980 aa12.23□□□□□ -0.45
ATL3-204ENST00000540699 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CPLX1O14810 134 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CDKL5O76039 1030 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 F13A1P00488 732 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 XRCC5P13010 732 aaKnown RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 FLT3LGP49771 235 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 PRKCZQ05513 592 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 SRBD1Q8N5C6 995 aaKnown RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 MAF1Q9H063 256 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
ATL3-204ENST00000540699 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CCPG1Q9ULG6 757 aa12.22□□□□□ -0.45
ATL3-204ENST00000540699 CNTNAP5Q8WYK1 1306 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms