RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TRAF5O00463 557 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 POLR2DO15514 142 aaKnown RBP10.86□□□□□ -0.67
PAAF1-209ENST00000540659 ASNSP08243 561 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 FMR1Q06787 632 aaKnown RBP eCLIP10.86□□□□□ -0.67
PAAF1-209ENST00000540659 STX1AQ16623 288 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 LONRF3Q496Y0 759 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 DCAF15Q66K64 600 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 USP49Q70CQ1 688 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 FBXO11Q86XK2 927 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
PAAF1-209ENST00000540659 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
PAAF1-209ENST00000540659 CUL5Q93034 780 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 FERMT2Q96AC1 680 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 MTMR8Q96EF0 704 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 EPSTI1Q96J88 318 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 ZNF341Q9BYN7 854 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 VCPKMTQ9H867 229 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 RIC8AQ9NPQ8 531 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 PRR12Q9ULL5 1215 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 PCDHA1Q9Y5I3 950 aa10.86□□□□□ -0.67
PAAF1-209ENST00000540659 FAM237AA0A1B0GTK4 181 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 BIN1O00499 593 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 FOXN1O15353 648 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 INPP5BP32019 993 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 STAT2P52630 851 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 MAP3K10Q02779 954 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 PNOCQ13519 176 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 DGKZQ13574 1117 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 PRKG1Q13976 671 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 ZRSR1Q15695 479 aaKnown RBP10.85□□□□□ -0.67
PAAF1-209ENST00000540659 IL17AQ16552 155 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 C11orf57Q6ZUT1 292 aaPredicted RBP10.85□□□□□ -0.67
PAAF1-209ENST00000540659 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
PAAF1-209ENST00000540659 DHX58Q96C10 678 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 TIGD1Q96MW7 591 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 TMEM60Q9H2L4 133 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 MYH7BA7E2Y1 1941 aa10.85□□□□□ -0.67
PAAF1-209ENST00000540659 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 MRPL12P52815 198 aaKnown RBP10.84□□□□□ -0.67
PAAF1-209ENST00000540659 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 UVSSAQ2YD98 709 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 LUZP1Q86V48 1076 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 GRAMD1CQ8IYS0 662 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 C4orf32Q8N8J7 132 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 AMNQ9BXJ7 453 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 MORC2Q9Y6X9 1032 aaPredicted RBP10.84□□□□□ -0.67
PAAF1-209ENST00000540659 PHIPQ8WWQ0 1821 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
PAAF1-209ENST00000540659 A0A087X0B3 334 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 NEMFO60524 1076 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.68
PAAF1-209ENST00000540659 TDP2O95551 362 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 OR52Z1P0C646 297 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 NF2P35240 595 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 CLK2P49760 499 aaKnown RBP10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 BTNL9Q6UXG8 535 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 DLK2Q6UY11 383 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 KRT26Q7Z3Y9 468 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 ZKSCAN4Q969J2 545 aaPredicted RBP10.83□□□□□ -0.68
PAAF1-209ENST00000540659 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
PAAF1-209ENST00000540659 WRNIP1Q96S55 665 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 ANO10Q9NW15 660 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 USP25Q9UHP3 1055 aa10.83□□□□□ -0.68
PAAF1-209ENST00000540659 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
PAAF1-209ENST00000540659 TMEM88BA6NKF7 163 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 PP2D1A8MPX8 630 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 CDC25AP30304 524 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 LONP1P36776 959 aaKnown RBP10.82□□□□□ -0.68
PAAF1-209ENST00000540659 TXLNAP40222 546 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 AFMP43652 599 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 ZNF165P49910 485 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 NLRP12P59046 1061 aa10.82□□□□□ -0.68
PAAF1-209ENST00000540659 ARL6IP4Q66PJ3 421 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms