RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 DCAF4Q8WV16 495 aa14.21□□□□□ -0.13
CBX3P4-202ENST00000540428 EVI5LQ96CN4 794 aa14.21□□□□□ -0.13
CBX3P4-202ENST00000540428 CYP39A1Q9NYL5 469 aa14.21□□□□□ -0.13
CBX3P4-202ENST00000540428 PRR12Q9ULL5 1215 aa14.21□□□□□ -0.13
CBX3P4-202ENST00000540428 ASTN1O14525 1302 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 UNC80Q8N2C7 3258 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 LOC102724159A0A0B4J2E5 919 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 ZEB2O60315 1214 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 ICAM1P05362 532 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 CSF2RAP15509 400 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 PWP2Q15269 919 aaKnown RBP14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 C16orf59Q7L2K0 433 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 TLK2Q86UE8 772 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 TIFAQ96CG3 184 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 AP5M1Q9H0R1 490 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 ZNF576Q9H609 170 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
CBX3P4-202ENST00000540428 RANBP6O60518 1105 aaKnown RBP14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 NMT2O60551 498 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 SMPD1P17405 629 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 BEX3Q00994 111 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 GRIN2CQ14957 1233 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 FSCN1Q16658 493 aaKnown RBP14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 MUM1L1Q5H9M0 696 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 TAPT1Q6NXT6 567 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 CXCL17Q6UXB2 119 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 BTNL9Q6UXG8 535 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 PPP1R12CQ9BZL4 782 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 RANBP17Q9H2T7 1088 aaKnown RBP14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 VTA1Q9NP79 307 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
CBX3P4-202ENST00000540428 DYNC1LI2O43237 492 aaPredicted RBP14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 VPS53Q5VIR6 699 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 NSMFQ6X4W1 530 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 ZNF365Q70YC5 407 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 PBX4Q9BYU1 374 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 IL23AQ9NPF7 189 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
CBX3P4-202ENST00000540428 ZMYM6O95789 1325 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 FBXO16Q8IX29 292 aaPredicted RBP14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 CHMP4CQ96CF2 233 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 PDGFCQ9NRA1 345 aa14.17□□□□□ -0.14
CBX3P4-202ENST00000540428 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 MCM3APO60318 1980 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 FGAP02671 866 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 ACRP10323 421 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 PCP11498 1178 aaKnown RBP14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 CYP2C18P33260 490 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 PDE1AP54750 535 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 SNAP25P60880 206 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 RAB30Q15771 203 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 DUSP28Q4G0W2 176 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 SYDE2Q5VT97 1194 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 EEPD1Q7L9B9 569 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 RASGRP2Q7LDG7 609 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 TMEM47Q9BQJ4 181 aa14.16□□□□□ -0.14
CBX3P4-202ENST00000540428 CDH23Q9H251 3354 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 RBM47A0AV96 593 aaKnown RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 FGBP02675 491 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 ALDH5A1P51649 535 aaPredicted RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 HDAC1Q13547 482 aaPredicted RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 BAATQ14032 418 aaPredicted RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 TTC14Q96N46 770 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 GAS2L1Q99501 681 aaPredicted RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 NOC4LQ9BVI4 516 aaKnown RBP14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 MSRAQ9UJ68 235 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 MTMR7Q9Y216 660 aa14.15□□□□□ -0.14
CBX3P4-202ENST00000540428 NFIBO00712 420 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 B4GALT4O60513 344 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 HSPD1P10809 573 aaKnown RBP14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 SLC16A2P36021 539 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 PBX2P40425 430 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 NT5C2P49902 561 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 AKNAD1Q5T1N1 836 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 MPHOSPH6Q99547 160 aaKnown RBP14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
CBX3P4-202ENST00000540428 LRRC37A2A6NM11 1700 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms