RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SYKP43405 635 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 PTGDRQ13258 359 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 INF2Q27J81 1249 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 FAM83BQ5T0W9 1011 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 MCTP2Q6DN12 878 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 FEM1BQ9UK73 627 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 PRR12Q9ULL5 1215 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 PCDHA1Q9Y5I3 950 aa19.21■□□□□ 0.67
COPS3-212ENST00000539941 MCM7P33993 719 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 CLK2P49760 499 aaKnown RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 NEK8Q86SG6 692 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 FBXO11Q86XK2 927 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 POTEIP0CG38 1075 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 POTEJP0CG39 1038 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 UTP14CQ5TAP6 766 aaKnown RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 DCPSQ96C86 337 aaKnown RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 WDR18Q9BV38 432 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 GLIS2Q9BZE0 524 aaPredicted RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 RBSNQ9H1K0 784 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 AS3MTQ9HBK9 375 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
COPS3-212ENST00000539941 KCNH3Q9ULD8 1083 aa19.2■□□□□ 0.66
COPS3-212ENST00000539941 INPP5BP32019 993 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 USP14P54578 494 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 HTRA3P83110 453 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 JAKMIP3Q5VZ66 844 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 USP50Q70EL3 339 aaPredicted RBP19.19■□□□□ 0.66
COPS3-212ENST00000539941 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
COPS3-212ENST00000539941 C4orf32Q8N8J7 132 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 SDF4Q9BRK5 362 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 PICK1Q9NRD5 415 aa19.19■□□□□ 0.66
COPS3-212ENST00000539941 SSC5DA1L4H1 1573 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 MSNP26038 577 aaKnown RBP19.18■□□□□ 0.66
COPS3-212ENST00000539941 PRPHP41219 470 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 NOL9Q5SY16 702 aaKnown RBP19.18■□□□□ 0.66
COPS3-212ENST00000539941 CKAP2LQ8IYA6 745 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 TBCKQ8TEA7 893 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 KLRG1Q96E93 195 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 CSRNP2Q9H175 543 aa19.18■□□□□ 0.66
COPS3-212ENST00000539941 RANBP17Q9H2T7 1088 aaKnown RBP19.18■□□□□ 0.66
COPS3-212ENST00000539941 TAF1DQ9H5J8 278 aaPredicted RBP19.18■□□□□ 0.66
COPS3-212ENST00000539941 POLR2AP24928 1970 aaKnown RBP19.18■□□□□ 0.66
COPS3-212ENST00000539941 GRIN1Q05586 938 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 TYRO3Q06418 890 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 ZYXQ15942 572 aaKnown RBP19.17■□□□□ 0.66
COPS3-212ENST00000539941 SASS6Q6UVJ0 657 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 SULF1Q8IWU6 871 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 ZC3H15Q8WU90 426 aaKnown RBP19.17■□□□□ 0.66
COPS3-212ENST00000539941 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 CAVIN2O95810 425 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 AP3B2Q13367 1082 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 CCDC84Q86UT8 332 aaPredicted RBP19.17■□□□□ 0.66
COPS3-212ENST00000539941 NAP1L4Q99733 375 aaKnown RBP19.17■□□□□ 0.66
COPS3-212ENST00000539941 TMEM260Q9NX78 707 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
COPS3-212ENST00000539941 PTPRAP18433 802 aa19.16■□□□□ 0.66
COPS3-212ENST00000539941 LONP1P36776 959 aaKnown RBP19.16■□□□□ 0.66
COPS3-212ENST00000539941 PRAMEF18Q5VWM3 479 aa19.16■□□□□ 0.66
COPS3-212ENST00000539941 PYM1Q9BRP8 204 aaKnown RBP19.16■□□□□ 0.66
COPS3-212ENST00000539941 VWA3AA6NCI4 1184 aa19.15■□□□□ 0.66
COPS3-212ENST00000539941 LETM2Q2VYF4 491 aa19.15■□□□□ 0.66
COPS3-212ENST00000539941 CHADLQ6NUI6 762 aa19.15■□□□□ 0.66
COPS3-212ENST00000539941 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
COPS3-212ENST00000539941 HOOK1Q9UJC3 728 aaKnown RBP19.15■□□□□ 0.66
COPS3-212ENST00000539941 SCN4AP35499 1836 aa19.15■□□□□ 0.66
COPS3-212ENST00000539941 DYNC1I1O14576 645 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 NEMFO60524 1076 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 CCNT1O60563 726 aaKnown RBP19.14■□□□□ 0.66
COPS3-212ENST00000539941 FOSP01100 380 aaPredicted RBP19.14■□□□□ 0.66
COPS3-212ENST00000539941 BACE1P56817 501 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 UBE2SQ16763 222 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 UVSSAQ2YD98 709 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 KANK3Q6NY19 840 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 KRBA2Q6ZNG9 492 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 KIFC2Q96AC6 838 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 USP25Q9UHP3 1055 aa19.14■□□□□ 0.66
COPS3-212ENST00000539941 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 PIK3CDO00329 1044 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 GCFC2P16383 781 aaKnown RBP19.14■□□□□ 0.65
COPS3-212ENST00000539941 EPHX2P34913 555 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 MTMR2Q13614 643 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 PPP4R3AQ6IN85 833 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 DTHD1Q6ZMT9 781 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 PRPF38AQ8NAV1 312 aaKnown RBP19.14■□□□□ 0.65
COPS3-212ENST00000539941 CNNM3Q8NE01 707 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.14■□□□□ 0.65
COPS3-212ENST00000539941 SYMPKQ92797 1274 aaKnown RBP19.14■□□□□ 0.65
COPS3-212ENST00000539941 ZKSCAN4Q969J2 545 aaPredicted RBP19.14■□□□□ 0.65
COPS3-212ENST00000539941 C12orf42Q96LP6 360 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 SLF1Q9BQI6 1058 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 KIAA1468Q9P260 1216 aa19.14■□□□□ 0.65
COPS3-212ENST00000539941 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms