RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CSRNP2Q9H175 543 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 BIN2Q9UBW5 565 aaPredicted RBP19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 TMX2Q9Y320 296 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 SBF1O95248 1867 aa19.4■□□□□ 0.7
PCDHB17P-201ENST00000539533 FAM237AA0A1B0GTK4 181 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 CTAGE5O15320 804 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 BMP3P12645 472 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 C11orf57Q6ZUT1 292 aaPredicted RBP19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 DICER1Q9UPY3 1922 aaKnown RBP19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 ESYT2A0FGR8 921 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 TMEM232C9JQI7 657 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 EPS15P42566 896 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 SNAP25P60880 206 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 STX1AQ16623 288 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 JAKMIP3Q5VZ66 844 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 USP49Q70CQ1 688 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 TMEM260Q9NX78 707 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 KCNH3Q9ULD8 1083 aa19.39■□□□□ 0.69
PCDHB17P-201ENST00000539533 BMP15O95972 392 aa19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 ATP2C1P98194 919 aaPredicted RBP19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 QRICH1Q2TAL8 776 aa19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 NBPF12Q5TAG4 269 aaPredicted RBP19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 ANGEL2Q5VTE6 544 aaKnown RBP19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 ZNF579Q8NAF0 562 aaKnown RBP19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 MRFAP1L1Q96HT8 127 aa19.38■□□□□ 0.69
PCDHB17P-201ENST00000539533 IKQ13123 557 aaPredicted RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 ZYXQ15942 572 aaKnown RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 REXO1Q8N1G1 1221 aaKnown RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 MORC2Q9Y6X9 1032 aaPredicted RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 DDNO94850 711 aaPredicted RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 HIRAP54198 1017 aaPredicted RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 CDC37Q16543 378 aaPredicted RBP19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 ILDR2Q71H61 639 aa19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 CCDC112Q8NEF3 446 aa19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 SYNPO2Q9UMS6 1093 aa19.37■□□□□ 0.69
PCDHB17P-201ENST00000539533 A0A087WWV3 80 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 ASNSP08243 561 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 ADCY7P51828 1080 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 LONRF3Q496Y0 759 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 C4orf32Q8N8J7 132 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 FEZ1Q99689 392 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 RNF181Q9P0P0 153 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
PCDHB17P-201ENST00000539533 VWA3AA6NCI4 1184 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 NEMFO60524 1076 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 IL17AQ16552 155 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 SYDE2Q5VT97 1194 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 FERMT2Q96AC1 680 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 CEP135Q66GS9 1140 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 TIGD1Q96MW7 591 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 RIC8AQ9NPQ8 531 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 PCDHA1Q9Y5I3 950 aa19.35■□□□□ 0.69
PCDHB17P-201ENST00000539533 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 ARID5BQ14865 1188 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 UBE2SQ16763 222 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 PPP1R18Q6NYC8 613 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 BTNL9Q6UXG8 535 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 PDILTQ8N807 584 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 TBCKQ8TEA7 893 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 BECN2A8MW95 431 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 LETM2Q2VYF4 491 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 TMEM60Q9H2L4 133 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 GGA3Q9NZ52 723 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 KIAA1468Q9P260 1216 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 FZD1Q9UP38 647 aa19.34■□□□□ 0.69
PCDHB17P-201ENST00000539533 DHX40Q8IX18 779 aaKnown RBP19.33■□□□□ 0.69
PCDHB17P-201ENST00000539533 SYMPKQ92797 1274 aaKnown RBP19.33■□□□□ 0.69
PCDHB17P-201ENST00000539533 PSTPIP2Q9H939 334 aa19.33■□□□□ 0.69
PCDHB17P-201ENST00000539533 PRR12Q9ULL5 1215 aa19.33■□□□□ 0.69
PCDHB17P-201ENST00000539533 CCNT1O60563 726 aaKnown RBP19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 INPP5BP32019 993 aa19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 KRBA2Q6ZNG9 492 aa19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 CUL5Q93034 780 aa19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 ZNF341Q9BYN7 854 aa19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 ANO10Q9NW15 660 aa19.33■□□□□ 0.68
PCDHB17P-201ENST00000539533 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 STAT2P52630 851 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 NAA30Q147X3 362 aaPredicted RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 NEK8Q86SG6 692 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 APOBEC3FQ8IUX4 373 aaKnown RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 CNNM3Q8NE01 707 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 ZNF592Q92610 1267 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 OGFRQ9NZT2 677 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 CGNQ9P2M7 1197 aaKnown RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 A0A087X0B3 334 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 USP27XA6NNY8 438 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 CTNND1O60716 968 aaKnown RBP19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 SKILP12757 684 aa19.32■□□□□ 0.68
PCDHB17P-201ENST00000539533 CLK2P49760 499 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms