RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
CCDC7-209ENST00000539197 FGF10O15520 208 aaPredicted RBP9.07□□□□□ -0.96
CCDC7-209ENST00000539197 TACR1P25103 407 aa9.07□□□□□ -0.96
CCDC7-209ENST00000539197 NOP2P46087 812 aaKnown RBP9.07□□□□□ -0.96
CCDC7-209ENST00000539197 LIMS1P48059 325 aa9.07□□□□□ -0.96
CCDC7-209ENST00000539197 MAPKAPK2P49137 400 aa9.07□□□□□ -0.96
CCDC7-209ENST00000539197 ZC3H14Q6PJT7 736 aaKnown RBP9.07□□□□□ -0.96
CCDC7-209ENST00000539197 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
CCDC7-209ENST00000539197 CXorf38Q8TB03 319 aa9.07□□□□□ -0.96
CCDC7-209ENST00000539197 NOL6Q9H6R4 1146 aaKnown RBP9.07□□□□□ -0.96
CCDC7-209ENST00000539197 A0A1W2PQJ5 194 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 GUCY2CP25092 1073 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 CYP2R1Q6VVX0 501 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 TP53I13Q8NBR0 393 aaPredicted RBP9.06□□□□□ -0.96
CCDC7-209ENST00000539197 ZDHHC15Q96MV8 337 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 SRRTQ9BXP5 876 aaKnown RBP9.06□□□□□ -0.96
CCDC7-209ENST00000539197 FHOD1Q9Y613 1164 aa9.06□□□□□ -0.96
CCDC7-209ENST00000539197 CBFA2T2O43439 604 aa9.05□□□□□ -0.96
CCDC7-209ENST00000539197 PFKLP17858 780 aa9.05□□□□□ -0.96
CCDC7-209ENST00000539197 ZNF214Q9UL59 606 aaPredicted RBP9.05□□□□□ -0.96
CCDC7-209ENST00000539197 CD3EP07766 207 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 DBHP09172 617 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 IGFBP6P24592 240 aaPredicted RBP9.04□□□□□ -0.96
CCDC7-209ENST00000539197 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 PAQR3Q6TCH7 311 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 RBBP8NLQ8NC74 664 aaPredicted RBP9.04□□□□□ -0.96
CCDC7-209ENST00000539197 MCMBPQ9BTE3 642 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 ADAM7Q9H2U9 754 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 RXFP1Q9HBX9 757 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 LUC7LQ9NQ29 371 aaKnown RBP9.04□□□□□ -0.96
CCDC7-209ENST00000539197 GINM1Q9NU53 330 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 DDX41Q9UJV9 622 aaKnown RBP9.04□□□□□ -0.96
CCDC7-209ENST00000539197 SF3B6Q9Y3B4 125 aaKnown RBP9.04□□□□□ -0.96
CCDC7-209ENST00000539197 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
CCDC7-209ENST00000539197 CYBBP04839 570 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 BICRALQ6AI39 1079 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 ADCY4Q8NFM4 1077 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 PTCHD1Q96NR3 888 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 PDLIM7Q9NR12 457 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 PCDHB10Q9UN67 800 aa9.03□□□□□ -0.96
CCDC7-209ENST00000539197 FFAR3O14843 346 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 SRGAP3O43295 1099 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 ITGA4P13612 1032 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 FBLN1P23142 703 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 TARBP2Q15633 366 aaKnown RBP9.02□□□□□ -0.97
CCDC7-209ENST00000539197 ADGRG2Q8IZP9 1017 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 RNF34Q969K3 372 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
CCDC7-209ENST00000539197 FBLN5Q9UBX5 448 aa9.02□□□□□ -0.97
CCDC7-209ENST00000539197 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
CCDC7-209ENST00000539197 PAK2Q13177 524 aa9.01□□□□□ -0.97
CCDC7-209ENST00000539197 TCEAL1Q15170 157 aa9.01□□□□□ -0.97
CCDC7-209ENST00000539197 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
CCDC7-209ENST00000539197 ZC3H12DA2A288 527 aaKnown RBP9□□□□□ -0.97
CCDC7-209ENST00000539197 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
CCDC7-209ENST00000539197 ATF2P15336 505 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 MC3RP41968 323 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 CORO7P57737 925 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 PRR5P85299 388 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 CAP1Q01518 475 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 POU4F1Q01851 419 aa9□□□□□ -0.97
CCDC7-209ENST00000539197 SKOR2Q2VWA4 1001 aaPredicted RBP9□□□□□ -0.97
CCDC7-209ENST00000539197 A0A087WZG4 1122 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 A0A1B0GTL3 188 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 F8W031 263 aaPredicted RBP8.99□□□□□ -0.97
CCDC7-209ENST00000539197 VAMP4O75379 141 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 RECKO95980 971 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 CELA3BP08861 270 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 TMCO4Q5TGY1 634 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 TEPSINQ96N21 525 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 HAUS7Q99871 368 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
CCDC7-209ENST00000539197 DIS3Q9Y2L1 958 aaKnown RBP8.99□□□□□ -0.97
CCDC7-209ENST00000539197 L1CAMP32004 1257 aa8.98□□□□□ -0.97
CCDC7-209ENST00000539197 GNPTABQ3T906 1256 aa8.98□□□□□ -0.97
CCDC7-209ENST00000539197 NLGN2Q8NFZ4 835 aa8.98□□□□□ -0.97
CCDC7-209ENST00000539197 FGD4Q96M96 766 aa8.98□□□□□ -0.97
CCDC7-209ENST00000539197 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
CCDC7-209ENST00000539197 STXBP3O00186 592 aa8.97□□□□□ -0.97
CCDC7-209ENST00000539197 DPY19L1Q2PZI1 675 aa8.97□□□□□ -0.97
CCDC7-209ENST00000539197 FRMD5Q7Z6J6 570 aa8.97□□□□□ -0.97
CCDC7-209ENST00000539197 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
CCDC7-209ENST00000539197 KLHL25Q9H0H3 589 aa8.97□□□□□ -0.97
CCDC7-209ENST00000539197 PPP1R11O60927 126 aaPredicted RBP8.96□□□□□ -0.98
CCDC7-209ENST00000539197 KCNC1P48547 511 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 FOXO4P98177 505 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 VWA3BQ502W6 1294 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.98
CCDC7-209ENST00000539197 RNF38Q9H0F5 515 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 WHRNQ9P202 907 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 FAN1Q9Y2M0 1017 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 RWDD3Q9Y3V2 267 aa8.96□□□□□ -0.98
CCDC7-209ENST00000539197 A0A1W2PQH9 124 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 EPHX1P07099 455 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms