RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 STK38Q15208 465 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 NONOQ15233 471 aaKnown RBP eCLIP17.63■□□□□ 0.41
VAMP1-207ENST00000539047 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 FAM173BQ6P4H8 233 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 EHMT1Q9H9B1 1298 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
VAMP1-207ENST00000539047 YEATS4O95619 227 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 DSG3P32926 999 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
VAMP1-207ENST00000539047 PIK3AP1Q6ZUJ8 805 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 SHISA4Q96DD7 197 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
VAMP1-207ENST00000539047 VWA5AO00534 786 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 HOXA7P31268 230 aaPredicted RBP17.61■□□□□ 0.41
VAMP1-207ENST00000539047 CEBPZQ03701 1054 aaKnown RBP17.61■□□□□ 0.41
VAMP1-207ENST00000539047 AP3B2Q13367 1082 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 NPY5RQ15761 445 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 ANO1Q5XXA6 986 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 CPXCR1Q8N123 301 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 KCNG4Q8TDN1 519 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
VAMP1-207ENST00000539047 ATG4CQ96DT6 458 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 RTEL1Q9NZ71 1219 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
VAMP1-207ENST00000539047 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 ELP1O95163 1332 aa17.61■□□□□ 0.41
VAMP1-207ENST00000539047 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 PRPF40AO75400 957 aaKnown RBP17.6■□□□□ 0.41
VAMP1-207ENST00000539047 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-207ENST00000539047 SKOR2Q2VWA4 1001 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-207ENST00000539047 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 CST9Q5W186 159 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
VAMP1-207ENST00000539047 BIN2Q9UBW5 565 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-207ENST00000539047 PASKQ96RG2 1323 aa17.6■□□□□ 0.41
VAMP1-207ENST00000539047 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 MBD3O95983 291 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 ALAS1P13196 640 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
VAMP1-207ENST00000539047 CCL15Q16663 113 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 JAKMIP3Q5VZ66 844 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 SPRYD7Q5W111 196 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 LEO1Q8WVC0 666 aaPredicted RBP17.59■□□□□ 0.41
VAMP1-207ENST00000539047 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
VAMP1-207ENST00000539047 ABT1Q9ULW3 272 aaKnown RBP17.59■□□□□ 0.41
VAMP1-207ENST00000539047 SLC45A1Q9Y2W3 748 aa17.59■□□□□ 0.41
VAMP1-207ENST00000539047 SPDYE16A6NNV3 312 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-207ENST00000539047 GCOM1H8Y6P7 765 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-207ENST00000539047 M0R2N6 131 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 POLR2MP0CAP2 368 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 COPB2P35606 906 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 GJA5P36382 358 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 NASPP49321 788 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-207ENST00000539047 NBR1Q14596 966 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 PLS1Q14651 629 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.4
VAMP1-207ENST00000539047 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 NEK8Q86SG6 692 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-207ENST00000539047 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
VAMP1-207ENST00000539047 TMEM88BA6NKF7 163 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 ATP2A1O14983 1001 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 SPTLC2O15270 562 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 CFBP00751 764 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 ME1P48163 572 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 UBE2HP62256 183 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
VAMP1-207ENST00000539047 ORC2Q13416 577 aaPredicted RBP17.57■□□□□ 0.4
VAMP1-207ENST00000539047 UBE2SQ16763 222 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 CHAMP1Q96JM3 812 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
VAMP1-207ENST00000539047 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
VAMP1-207ENST00000539047 ZNF536O15090 1300 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
VAMP1-207ENST00000539047 HERVK_113P62684 666 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 INF2Q27J81 1249 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 LBX2Q6XYB7 198 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
VAMP1-207ENST00000539047 SMCR8Q8TEV9 937 aaPredicted RBP17.56■□□□□ 0.4
VAMP1-207ENST00000539047 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms