RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 BFSP1Q12934 665 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 DPP8Q6V1X1 898 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 BLIDQ8IZY5 108 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 CSRNP1Q96S65 589 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 YIPF3Q9GZM5 350 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ABCC2Q92887 1545 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 PPP1R12AO14974 1030 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 CDKL2Q92772 493 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 SPDL1Q96EA4 605 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 KIF2CQ99661 725 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 SCOCQ9UIL1 159 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 G3BP2Q9UN86 482 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 TPD52L2O43399 206 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 SUN1O94901 812 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 MMS22LQ6ZRQ5 1243 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ZBTB8OSQ8IWT0 167 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ANO3Q9BYT9 981 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 CCDC68Q9H2F9 335 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 TBX22Q9Y458 520 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 K7ENM7 598 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 EVI5O60447 810 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 TCP10Q12799 353 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 IPO11Q9UI26 975 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ZMYM3Q14202 1370 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 H0YCG3 227 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 MAGEA9P43362 315 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 TAF11Q15544 211 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ACRBPQ8NEB7 543 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 GLG1Q92896 1179 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 HDAC11Q96DB2 347 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 PNMA6EA0A0J9YXQ4 647 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 HNRNPCP07910 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 MX2P20592 715 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 IL9RQ01113 521 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ADAT2Q7Z6V5 191 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 TCP11Q8WWU5 503 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 METTL14Q9HCE5 456 aaKnown RBP10.85□□□□□ -0.67
COL4A6-208ENST00000538570 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
COL4A6-208ENST00000538570 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ETF1P62495 437 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PTPROQ16827 1216 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ANKRD20A4Q4UJ75 823 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ANKRD20A8PQ5CZ79 823 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ANKRD20A2Q5SQ80 823 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SPOUT1Q5T280 376 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 MFSD4BQ5TF39 518 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ANKRD20A1Q5TYW2 823 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SUPT20HQ8NEM7 779 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 NDUFB9Q9Y6M9 179 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 USP19O94966 1318 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 MYO1CO00159 1063 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SERPINI2O75830 405 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 H2AFZP0C0S5 128 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ATP5JP18859 108 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 H2AFVQ71UI9 128 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 KDRP35968 1356 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 RPN1P04843 607 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 CMA1P23946 247 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ECE1P42892 770 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PHEXP78562 749 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ASPHQ12797 758 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 METTL13Q8N6R0 699 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 FLCNQ8NFG4 579 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PCDHA12Q9UN75 941 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF148Q9UQR1 794 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 LMNB1P20700 586 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SAT1P21673 171 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PSMD7P51665 324 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PRPSAP1Q14558 356 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ARHGEF16Q5VV41 709 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SPATA1Q5VX52 437 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 TBC1D22AQ8WUA7 517 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 OR52Z1P0C646 297 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 GCKRQ14397 625 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 KAZNQ674X7 775 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
COL4A6-208ENST00000538570 CCDC197Q8NCU1 140 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 PPME1Q9Y570 386 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 SSH2Q76I76 1423 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 GUCY2DQ02846 1103 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 NUDCD3Q8IVD9 361 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms