RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SUSD4Q5VX71 490 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 SV2BQ7L1I2 683 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 TXNRD3Q86VQ6 643 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 DZIP1LQ8IYY4 767 aaKnown RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ZBTB38Q8NAP3 1195 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 TRIM56Q9BRZ2 755 aaKnown RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 RUSC1Q9BVN2 902 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ZC3H12CQ9C0D7 883 aaKnown RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 CHMP4BQ9H444 224 aaKnown RBP5.37□□□□□ -1.55
SNHG1-208ENST00000538266 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 HDAC5Q9UQL6 1122 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 SAMM50Q9Y512 469 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 ABCC4O15439 1325 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 NRXN2Q9P2S2 1712 aa5.37□□□□□ -1.55
SNHG1-208ENST00000538266 MEGF11A6BM72 1044 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 IRS4O14654 1257 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 ENC1O14682 589 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 PLIN1O60240 522 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 NTSR2O95665 410 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 ECEL1O95672 775 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 DLGAP3O95886 979 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 PCCAP05165 728 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 IGKV5-2P06315 115 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 UBTFL1P0CB47 393 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 BMP6P22004 513 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 NME2P22392 152 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 RRP1P56182 461 aaKnown RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 INTS3Q68E01 1043 aaKnown RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 PRR5LQ6MZQ0 368 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 GPAT2Q6NUI2 795 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 C12orf50Q8NA57 414 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 RPGRQ92834 1020 aaKnown RBP5.36□□□□□ -1.55
SNHG1-208ENST00000538266 KCNB2Q92953 911 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 FAM89AQ96GI7 184 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 BRIP1Q9BX63 1249 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 EMILIN2Q9BXX0 1053 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 NRSN2Q9GZP1 204 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 RNF208Q9H0X6 261 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 CD2APQ9Y5K6 639 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 C10orf71Q711Q0 1435 aa5.36□□□□□ -1.55
SNHG1-208ENST00000538266 LAMB2P55268 1798 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 RIC1Q4ADV7 1423 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 ABCC12Q96J65 1359 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 CDHR2Q9BYE9 1310 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 H0YIN7 160 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 MSTNO14793 375 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 PAGE1O75459 146 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 GNAI3P08754 354 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 HCLS1P14317 486 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-208ENST00000538266 GLB1P16278 677 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 TGFB2P61812 414 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 MRPL58Q14197 206 aaKnown RBP5.35□□□□□ -1.55
SNHG1-208ENST00000538266 PDE3AQ14432 1141 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 HP1BP3Q5SSJ5 553 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-208ENST00000538266 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 TMEM57Q8N5G2 664 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 TMEM87AQ8NBN3 555 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 GRIN3AQ8TCU5 1115 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 PANK1Q8TE04 598 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 JARID2Q92833 1246 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-208ENST00000538266 CRELD1Q96HD1 420 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 TMPRSS13Q9BYE2 586 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 BACH2Q9BYV9 841 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 CYP4F12Q9HCS2 524 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 DDX19BQ9UMR2 479 aa5.35□□□□□ -1.55
SNHG1-208ENST00000538266 KIF13BQ9NQT8 1826 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 TNRC6CQ9HCJ0 1690 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 UTYO14607 1347 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 SART1O43290 800 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 PDE8AO60658 829 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CTSBP07858 339 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CELA3AP09093 270 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 GSTP1P09211 210 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 NBPF7P0C2Y1 421 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 RLBP1P12271 317 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 NPR1P16066 1061 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 LIG1P18858 919 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 ST13P50502 369 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CTSWP56202 376 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CCDC152Q4G0S7 254 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 MAP1SQ66K74 1059 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 DDX46Q7L014 1031 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 C2CD5Q86YS7 1000 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 SYNE4Q8N205 404 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 MRRFQ96E11 262 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 RBM17Q96I25 401 aaKnown RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 UBL7Q96S82 380 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 MEIS3Q99687 375 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 SPOCK3Q9BQ16 436 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CEP41Q9BYV8 373 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 USP44Q9H0E7 712 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 TMX4Q9H1E5 349 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-208ENST00000538266 CYP8B1Q9UNU6 501 aa5.34□□□□□ -1.55
SNHG1-208ENST00000538266 TNNQ9UQP3 1299 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms