RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 MC3RP41968 323 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 AUHQ13825 339 aaKnown RBP4.75□□□□□ -1.65
SKA3-207ENST00000536239 NLRC3Q7RTR2 1065 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 TMC4Q7Z404 712 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 C14orf37Q86TY3 774 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 TTC9BQ8N6N2 239 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 SLC12A9Q9BXP2 914 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 LRRC3Q9BY71 257 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 EHMT1Q9H9B1 1298 aa4.75□□□□□ -1.65
SKA3-207ENST00000536239 SARSP49591 514 aaKnown RBP4.74□□□□□ -1.65
SKA3-207ENST00000536239 HMGA2P52926 109 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 KCNA1Q09470 495 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 FBXL19Q6PCT2 694 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 B3GNT8Q7Z7M8 397 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 ZNF761Q86XN6 746 aaPredicted RBP4.74□□□□□ -1.65
SKA3-207ENST00000536239 LOXL4Q96JB6 756 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 SLC6A18Q96N87 628 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 C8orf49Q96NF6 230 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 DSCC1Q9BVC3 393 aa4.74□□□□□ -1.65
SKA3-207ENST00000536239 DBR1Q9UK59 544 aaKnown RBP4.74□□□□□ -1.65
SKA3-207ENST00000536239 ANKRD33BA6NCL7 494 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 CORO7P57737 925 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 XPCQ01831 940 aaPredicted RBP4.73□□□□□ -1.65
SKA3-207ENST00000536239 TBC1D10BQ4KMP7 808 aaPredicted RBP4.73□□□□□ -1.65
SKA3-207ENST00000536239 CYP2R1Q6VVX0 501 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 NLGN2Q8NFZ4 835 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 ALG3Q92685 438 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 FAM161BQ96MY7 647 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 SRRTQ9BXP5 876 aaKnown RBP4.73□□□□□ -1.65
SKA3-207ENST00000536239 SCAND2PQ9GZW5 306 aaPredicted RBP4.73□□□□□ -1.65
SKA3-207ENST00000536239 KCNQ5Q9NR82 932 aa4.73□□□□□ -1.65
SKA3-207ENST00000536239 SPATA6Q9NWH7 488 aaPredicted RBP4.73□□□□□ -1.65
SKA3-207ENST00000536239 TNFRSF10CO14798 259 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 FGF10O15520 208 aaPredicted RBP4.72□□□□□ -1.65
SKA3-207ENST00000536239 GREM1O60565 184 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 PLATP00750 562 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 C6P13671 934 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 NME1P15531 152 aaKnown RBP4.72□□□□□ -1.65
SKA3-207ENST00000536239 CWF19L1Q69YN2 538 aaKnown RBP4.72□□□□□ -1.65
SKA3-207ENST00000536239 C7orf61Q8IZ16 206 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 NOX5Q96PH1 765 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 KBTBD4Q9NVX7 518 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 NTMQ9P121 344 aa4.72□□□□□ -1.65
SKA3-207ENST00000536239 TACR1P25103 407 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 PMLP29590 882 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 GDF5P43026 501 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 TTLL7Q6ZT98 887 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 SMARCC2Q8TAQ2 1214 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 MENTQ9BUN1 341 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 MRIQ9BWK5 157 aa4.71□□□□□ -1.66
SKA3-207ENST00000536239 SUPT16HQ9Y5B9 1047 aaKnown RBP4.71□□□□□ -1.66
SKA3-207ENST00000536239 H0Y8X5 98 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 SHOXO15266 292 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 SLPIP03973 132 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 GLI4P10075 376 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 TACR2P21452 398 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 EIF4A3P38919 411 aaKnown RBP4.7□□□□□ -1.66
SKA3-207ENST00000536239 NOP2P46087 812 aaKnown RBP4.7□□□□□ -1.66
SKA3-207ENST00000536239 CLCQ05315 142 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 GK5Q6ZS86 529 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 USP48Q86UV5 1035 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 REXO1Q8N1G1 1221 aaKnown RBP4.7□□□□□ -1.66
SKA3-207ENST00000536239 Q8N1X5 172 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 CHST13Q8NET6 341 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 ADAMTS17Q8TE56 1095 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 DVL3Q92997 716 aaPredicted RBP4.7□□□□□ -1.66
SKA3-207ENST00000536239 TSPAN17Q96FV3 270 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 SLC9A7Q96T83 725 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 BCAS3Q9H6U6 928 aa4.7□□□□□ -1.66
SKA3-207ENST00000536239 MEIS3P2A8K0S8 358 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 C9IYK1 514 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 CYR61O00622 381 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 SORBS3O60504 671 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 TBC1D8O95759 1140 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 L1CAMP32004 1257 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 ACVRL1P37023 503 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 CRKP46108 304 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
SKA3-207ENST00000536239 LRRFIP1Q32MZ4 808 aaKnown RBP4.69□□□□□ -1.66
SKA3-207ENST00000536239 ERMP1Q7Z2K6 904 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 SPRED1Q7Z699 444 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 CPA5Q8WXQ8 436 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 ZBTB8AQ96BR9 441 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 PTCHD1Q96NR3 888 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 FCRL3Q96P31 734 aaPredicted RBP4.69□□□□□ -1.66
SKA3-207ENST00000536239 SSBP3Q9BWW4 388 aaPredicted RBP4.69□□□□□ -1.66
SKA3-207ENST00000536239 RXFP1Q9HBX9 757 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 COPRSQ9NQ92 184 aa4.69□□□□□ -1.66
SKA3-207ENST00000536239 SUCOQ9UBS9 1254 aaKnown RBP4.69□□□□□ -1.66
SKA3-207ENST00000536239 KIAA2012Q0VF49 1180 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 SEZ6Q53EL9 994 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 ZFPM1Q8IX07 1006 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 CCDC144CPQ8IYA2 1237 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 LINC00482Q8N8I6 264 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 RGS22Q8NE09 1264 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 SH3RF3Q8TEJ3 882 aaPredicted RBP4.68□□□□□ -1.66
SKA3-207ENST00000536239 ZNF296Q8WUU4 475 aaPredicted RBP4.68□□□□□ -1.66
SKA3-207ENST00000536239 DHRS1Q96LJ7 313 aa4.68□□□□□ -1.66
SKA3-207ENST00000536239 SLITRK6Q9H5Y7 841 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms