RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PPP2R3AQ06190 1150 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 ZNF385BQ569K4 471 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 CDKAL1Q5VV42 579 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 ERICH6BQ5W0A0 696 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 TMEM151BQ8IW70 566 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 GPR101Q96P66 508 aaPredicted RBP5.8□□□□□ -1.48
YBX3-205ENST00000536107 C14orf93Q9H972 538 aaKnown RBP5.8□□□□□ -1.48
YBX3-205ENST00000536107 NPHS2Q9NP85 383 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 TMEM39AQ9NV64 488 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 TMEM59LQ9UK28 342 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 CNOT6Q9ULM6 557 aaKnown RBP5.8□□□□□ -1.48
YBX3-205ENST00000536107 AKAP12Q02952 1782 aa5.8□□□□□ -1.48
YBX3-205ENST00000536107 TRPM1Q7Z4N2 1603 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 ECE1P42892 770 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 FXR1P51114 621 aaKnown RBP eCLIP5.79□□□□□ -1.48
YBX3-205ENST00000536107 ERVFC1P60507 584 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 PPM1JQ5JR12 505 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 UBE3DQ7Z6J8 389 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 IRF2BP1Q8IU81 584 aa5.79□□□□□ -1.48
YBX3-205ENST00000536107 DNAJC25-GNG10A0A024R161 153 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 RING1Q06587 406 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 QSER1Q2KHR3 1735 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 ZXDCQ2QGD7 858 aaPredicted RBP5.78□□□□□ -1.48
YBX3-205ENST00000536107 EAPPQ56P03 285 aaPredicted RBP5.78□□□□□ -1.48
YBX3-205ENST00000536107 RALGPS1Q5JS13 557 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 SFRP5Q5T4F7 317 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 LDHDQ86WU2 507 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 KCT2Q8NC54 265 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 CAPNS2Q96L46 248 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 CDK19Q9BWU1 502 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 DNAJC25Q9H1X3 360 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 CACNA2D2Q9NY47 1150 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 BTAF1O14981 1849 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 KIF1BO60333 1816 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 TNRC6CQ9HCJ0 1690 aaKnown RBP5.78□□□□□ -1.48
YBX3-205ENST00000536107 POLR3AO14802 1390 aaPredicted RBP5.78□□□□□ -1.48
YBX3-205ENST00000536107 ANKRD36BQ8N2N9 1353 aa5.78□□□□□ -1.48
YBX3-205ENST00000536107 PASKQ96RG2 1323 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 MYOCOSA0A1B0GUC4 107 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 RFXAPO00287 272 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 FANCGO15287 622 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 CA12O43570 354 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 SASH1O94885 1247 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 ARNTP27540 789 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 SSFA2P28290 1259 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 ARHGEF25Q86VW2 580 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 SULF2Q8IWU5 870 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 KCNH5Q8NCM2 988 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 STK35Q8TDR2 534 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 GPBAR1Q8TDU6 330 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 RNF32Q9H0A6 362 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 GPN3Q9UHW5 284 aaPredicted RBP5.77□□□□□ -1.49
YBX3-205ENST00000536107 KCTD3Q9Y597 815 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 KNDC1Q76NI1 1749 aa5.77□□□□□ -1.49
YBX3-205ENST00000536107 PIK3C2GO75747 1445 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 NSD3Q9BZ95 1437 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 TEX51A0A1B0GUA7 166 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 OTOL1A6NHN0 477 aaPredicted RBP5.76□□□□□ -1.49
YBX3-205ENST00000536107 CPNE3O75131 537 aaKnown RBP5.76□□□□□ -1.49
YBX3-205ENST00000536107 LRIG2O94898 1065 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 SLITRK5O94991 958 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 KCNA3P22001 575 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 HK2P52789 917 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 TMF1P82094 1093 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 FKBP4Q02790 459 aaKnown RBP eCLIP5.76□□□□□ -1.49
YBX3-205ENST00000536107 MAP1SQ66K74 1059 aaPredicted RBP5.76□□□□□ -1.49
YBX3-205ENST00000536107 CYP4F22Q6NT55 531 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 NLGN1Q8N2Q7 840 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 UBE2FQ969M7 185 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 SLC6A17Q9H1V8 727 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 GCM1Q9NP62 436 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 TPX2Q9ULW0 747 aaKnown RBP5.76□□□□□ -1.49
YBX3-205ENST00000536107 ROCK1Q13464 1354 aa5.76□□□□□ -1.49
YBX3-205ENST00000536107 SPATA31E1Q6ZUB1 1445 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 ABCC6O95255 1503 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 IQCA1LA6NCM1 817 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 CHRNA5P30532 468 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 FGD1P98174 961 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 ZNF252P-AS1Q0IIN9 211 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 ZBTB37Q5TC79 503 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 CDC37L1Q7L3B6 337 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 TMPRSS7Q7RTY8 843 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 EMILIN2Q9BXX0 1053 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 SP110Q9HB58 689 aa5.75□□□□□ -1.49
YBX3-205ENST00000536107 CPSF1Q10570 1443 aaKnown RBP5.74□□□□□ -1.49
YBX3-205ENST00000536107 TUBGCP6Q96RT7 1819 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 DDNO94850 711 aaPredicted RBP5.74□□□□□ -1.49
YBX3-205ENST00000536107 MAP2K2P36507 400 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 MPRIPQ6WCQ1 1025 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 ZNF605Q86T29 641 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 CNTROBQ8N137 903 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 ZSWIM5Q9P217 1185 aa5.74□□□□□ -1.49
YBX3-205ENST00000536107 CSADQ9Y600 493 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms