RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
VPS33B-202ENST00000535906 POTEDQ86YR6 584 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 MRIQ9BWK5 157 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 RWDD2AQ9UIY3 292 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 SIPA1L1O43166 1804 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 ARHGAP6O43182 974 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 ADCY7P51828 1080 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 ETF1P62495 437 aaKnown RBP15.07■□□□□ 0
VPS33B-202ENST00000535906 PAK1Q13153 545 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 CCDC93Q567U6 631 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 KCTD1Q719H9 257 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 CABP7Q86V35 215 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 AK8Q96MA6 479 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 C10orf71Q711Q0 1435 aa15.07■□□□□ 0
VPS33B-202ENST00000535906 PNMA6FA0A0J9YX94 578 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 KLRC4O43908 158 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 PLCG1P19174 1290 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 AOC3Q16853 763 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 SH3BP5LQ7L8J4 393 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 NELFBQ8WX92 580 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 PHLPP2Q6ZVD8 1323 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 ZNF646O15015 1829 aaPredicted RBP15.06■□□□□ 0
VPS33B-202ENST00000535906 RXRBP28702 533 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 FKBP1AP62942 108 aaKnown RBP15.06■□□□□ 0
VPS33B-202ENST00000535906 KMT5BQ4FZB7 885 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 CCDC17Q96LX7 622 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 CTAGE1Q96RT6 745 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 BAG1Q99933 345 aaPredicted RBP15.06■□□□□ 0
VPS33B-202ENST00000535906 IDI2Q9BXS1 227 aa15.06■□□□□ 0
VPS33B-202ENST00000535906 TNS1Q9HBL0 1735 aaKnown RBP15.05■□□□□ 0
VPS33B-202ENST00000535906 SPDYE4A6NLX3 237 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 USP17L10C9JJH3 530 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 ZSCAN12O43309 604 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 PBX1P40424 430 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 CCDC96Q2M329 555 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ 0
VPS33B-202ENST00000535906 REXO1L1PQ8IX06 675 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 IGSF22Q8N9C0 903 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 MTMR9Q96QG7 549 aa15.05■□□□□ 0
VPS33B-202ENST00000535906 MMTAG2Q9BU76 263 aaKnown RBP15.05■□□□□ 0
VPS33B-202ENST00000535906 DHX36Q9H2U1 1008 aaKnown RBP15.05■□□□□ 0
VPS33B-202ENST00000535906 SLC37A4O43826 429 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 TDP2O95551 362 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 TXKP42681 527 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 HDLBPQ00341 1268 aaKnown RBP15.05■□□□□ -0
VPS33B-202ENST00000535906 KCNB1Q14721 858 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 TRIM65Q6PJ69 517 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 ZSCAN29Q8IWY8 852 aaPredicted RBP15.05■□□□□ -0
VPS33B-202ENST00000535906 ADSSL1Q8N142 457 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 ZNF397Q8NF99 534 aaPredicted RBP15.05■□□□□ -0
VPS33B-202ENST00000535906 OGFRQ9NZT2 677 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 PI4KBQ9UBF8 816 aa15.05■□□□□ -0
VPS33B-202ENST00000535906 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.05■□□□□ -0
VPS33B-202ENST00000535906 V9GYY5 206 aaPredicted RBP15.05■□□□□ -0
VPS33B-202ENST00000535906 LRRC10BA6NIK2 292 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 STX10O60499 249 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 MYL1P05976 194 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 CCT6AP40227 531 aaKnown RBP15.04■□□□□ -0
VPS33B-202ENST00000535906 ORC2Q13416 577 aaPredicted RBP15.04■□□□□ -0
VPS33B-202ENST00000535906 KRT31Q15323 416 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 UBE2SQ16763 222 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
VPS33B-202ENST00000535906 RIC8AQ9NPQ8 531 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 TRIM49BA6NDI0 452 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 ZBTB5O15062 677 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 RHOBTB3O94955 611 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 EEF2P13639 858 aaKnown RBP15.04■□□□□ -0
VPS33B-202ENST00000535906 ELF2Q15723 593 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 SLC15A2Q16348 729 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 CNKSR1Q969H4 720 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 MTMR8Q96EF0 704 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 CUEDC2Q9H467 287 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
VPS33B-202ENST00000535906 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
VPS33B-202ENST00000535906 RAD21O60216 631 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 CLK2P49760 499 aaKnown RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 PMS1P54277 932 aaKnown RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 RBL2Q08999 1139 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 CALCRLQ16602 461 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 DNAI1Q9UI46 699 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 DDX41Q9UJV9 622 aaKnown RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 AKR1B15C9JRZ8 316 aaPredicted RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 TNNI2P48788 182 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 TCP11X2Q5H9J9 407 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 PPP1R18Q6NYC8 613 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 SIAH1Q8IUQ4 282 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 GIMAP8Q8ND71 665 aaPredicted RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 CPLX3Q8WVH0 158 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 MKL1Q969V6 931 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 TRIM9Q9C026 710 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 TDRD3Q9H7E2 651 aaKnown RBP15.03■□□□□ -0
VPS33B-202ENST00000535906 PPP2R2CQ9Y2T4 447 aa15.03■□□□□ -0
VPS33B-202ENST00000535906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -0
VPS33B-202ENST00000535906 GOLGA6L9A6NEM1 432 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 KCNJ18B7U540 433 aa15.02■□□□□ -0
VPS33B-202ENST00000535906 KCNJ12Q14500 433 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms