RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 FEZ1Q99689 392 aa23.88■■□□□ 1.41
PDXDC1-205ENST00000535621 TMEM260Q9NX78 707 aa23.88■■□□□ 1.41
PDXDC1-205ENST00000535621 PCDHA1Q9Y5I3 950 aa23.88■■□□□ 1.41
PDXDC1-205ENST00000535621 STAT2P52630 851 aa23.87■■□□□ 1.41
PDXDC1-205ENST00000535621 ARL6IP4Q66PJ3 421 aaKnown RBP23.87■■□□□ 1.41
PDXDC1-205ENST00000535621 USP49Q70CQ1 688 aa23.87■■□□□ 1.41
PDXDC1-205ENST00000535621 NMRK2Q9NPI5 230 aa23.87■■□□□ 1.41
PDXDC1-205ENST00000535621 GINM1Q9NU53 330 aa23.87■■□□□ 1.41
PDXDC1-205ENST00000535621 TRAF5O00463 557 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 PTPRAP18433 802 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 CLK2P49760 499 aaKnown RBP23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 TBCKQ8TEA7 893 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 ERCC4Q92889 916 aaPredicted RBP23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 CUL5Q93034 780 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 PRR12Q9ULL5 1215 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 VWA3AA6NCI4 1184 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 IL17AQ16552 155 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 LONRF3Q496Y0 759 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 NEK8Q86SG6 692 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 PNMA8AQ86V59 439 aaPredicted RBP23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 PSTPIP2Q9H939 334 aa23.86■■□□□ 1.41
PDXDC1-205ENST00000535621 TAL1P17542 331 aaPredicted RBP23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 MRPL12P52815 198 aaKnown RBP23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 SPP2Q13103 211 aa23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 MTMR2Q13614 643 aa23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 CNKSR2Q8WXI2 1034 aa23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 AMNQ9BXJ7 453 aa23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 KIAA1468Q9P260 1216 aa23.85■■□□□ 1.41
PDXDC1-205ENST00000535621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 VGLL4Q14135 290 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 ANO6Q4KMQ2 910 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 KRBA2Q6ZNG9 492 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 EPSTI1Q96J88 318 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 PICK1Q9NRD5 415 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 UBE2SQ16763 222 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 LETM2Q2VYF4 491 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 SYMPKQ92797 1274 aaKnown RBP23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 GLT8D2Q9H1C3 349 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 SNCAIPQ9Y6H5 919 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 ZHX2Q9Y6X8 837 aa23.84■■□□□ 1.41
PDXDC1-205ENST00000535621 POLR2DO15514 142 aaKnown RBP23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 PLA2G6O60733 806 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 UVSSAQ2YD98 709 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 SAMD1Q6SPF0 538 aaPredicted RBP23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 FBXO11Q86XK2 927 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 FAM200AQ8TCP9 573 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 TMEM60Q9H2L4 133 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 FBXO28Q9NVF7 368 aa23.83■■□□□ 1.41
PDXDC1-205ENST00000535621 LAD1O00515 517 aa23.83■■□□□ 1.4
PDXDC1-205ENST00000535621 CCNT1O60563 726 aaKnown RBP23.83■■□□□ 1.4
PDXDC1-205ENST00000535621 ELOA2Q8IYF1 753 aaPredicted RBP23.83■■□□□ 1.4
PDXDC1-205ENST00000535621 CNNM3Q8NE01 707 aa23.83■■□□□ 1.4
PDXDC1-205ENST00000535621 CLMNQ96JQ2 1002 aa23.83■■□□□ 1.4
PDXDC1-205ENST00000535621 PTPRFP10586 1907 aa23.82■■□□□ 1.4
PDXDC1-205ENST00000535621 CHURC1Q8WUH1 139 aa23.82■■□□□ 1.4
PDXDC1-205ENST00000535621 ANP32BQ92688 251 aaKnown RBP23.82■■□□□ 1.4
PDXDC1-205ENST00000535621 EMILIN3Q9NT22 766 aa23.82■■□□□ 1.4
PDXDC1-205ENST00000535621 EDIL3O43854 480 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 ORC2Q13416 577 aaPredicted RBP23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 STX1AQ16623 288 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 KIAA1683Q9H0B3 1180 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 A0A087X0B3 334 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 PPP1R12BO60237 982 aaPredicted RBP23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 PRPHP41219 470 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 MAP3K9P80192 1104 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 TTLL12Q14166 644 aaPredicted RBP23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 NOL9Q5SY16 702 aaKnown RBP23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 PDILTQ8N807 584 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 DNAJC25Q9H1X3 360 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 ZNF408Q9H9D4 720 aa23.81■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L15C9J2P7 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L13C9JLJ4 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L11C9JVI0 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L18D6R9N7 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L22D6RA61 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L17D6RBQ6 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L19D6RCP7 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L20D6RJB6 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 CAVIN2O95810 425 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 LONP1P36776 959 aaKnown RBP23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 MDM2Q00987 491 aaPredicted RBP23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L24Q0WX57 530 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USH1GQ495M9 461 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 USP17L6PQ6QN14 398 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 ZNF280CQ8ND82 737 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 PARP14Q460N5 1801 aa23.8■■□□□ 1.4
PDXDC1-205ENST00000535621 ACTN4O43707 911 aaKnown RBP23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 NEMFO60524 1076 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 DTHD1Q6ZMT9 781 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 FAM160B2Q86V87 743 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 RANBP17Q9H2T7 1088 aaKnown RBP23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 SERTAD1Q9UHV2 236 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 FEM1BQ9UK73 627 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 A0A087WWV3 80 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 MEIS2O14770 477 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 PNOCQ13519 176 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 LPAR1Q92633 364 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 KIFC2Q96AC6 838 aa23.79■■□□□ 1.4
PDXDC1-205ENST00000535621 WDR18Q9BV38 432 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms