RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 BARHL2Q9NY43 387 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 ZNF536O15090 1300 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 ICAM1P05362 532 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 HSPA6P17066 643 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
SCARB1-204ENST00000535005 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 ZIC5Q96T25 663 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 STXBP3O00186 592 aa14.12□□□□□ -0.15
SCARB1-204ENST00000535005 GCLCP48506 637 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 SNAP25P60880 206 aa14.12□□□□□ -0.15
SCARB1-204ENST00000535005 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 WWC2Q6AWC2 1192 aa14.12□□□□□ -0.15
SCARB1-204ENST00000535005 PPP1R18Q6NYC8 613 aa14.12□□□□□ -0.15
SCARB1-204ENST00000535005 SYAP1Q96A49 352 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 PARK7Q99497 189 aaKnown RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 ZNF214Q9UL59 606 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-204ENST00000535005 RABGAP1Q9Y3P9 1069 aa14.12□□□□□ -0.15
SCARB1-204ENST00000535005 A0A0G2JMZ2 1700 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 AOC2O75106 756 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 XBP1P17861 261 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 VEGFBP49765 207 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-204ENST00000535005 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 FBXO18Q8NFZ0 1043 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 RBPJLQ9UBG7 517 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 CTDP1Q9Y5B0 961 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-204ENST00000535005 PCDHA1Q9Y5I3 950 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 ESYT2A0FGR8 921 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 CNMDO75829 334 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 ALDH1A1P00352 501 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 CYP2C8P10632 490 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 SYT1P21579 422 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 GRM1Q13255 1194 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 CCDC174Q6PII3 467 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 TEX2Q8IWB9 1127 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-204ENST00000535005 COA7Q96BR5 231 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 C8orf76Q96K31 380 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 TEX13BQ9BXU2 312 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
SCARB1-204ENST00000535005 BTBD7Q9P203 1132 aa14.11□□□□□ -0.15
SCARB1-204ENST00000535005 R3HCC1Q9Y3T6 440 aaKnown RBP14.11□□□□□ -0.15
SCARB1-204ENST00000535005 ABCB11O95342 1321 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 MYH6P13533 1939 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 UQCRHLA0A096LP55 91 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 UQCRHP07919 91 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 STAT3P40763 770 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 HTRA3P83110 453 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 TRIM29Q14134 588 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 TKFCQ3LXA3 575 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 KRT40Q6A162 431 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 GALNT17Q6IS24 598 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 TYW1BQ6NUM6 668 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 CCDC148Q8NFR7 591 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 GPKOWQ92917 476 aaPredicted RBP eCLIP14.1□□□□□ -0.15
SCARB1-204ENST00000535005 AGBL1Q96MI9 1066 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 PHF20Q9BVI0 1012 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.1□□□□□ -0.15
SCARB1-204ENST00000535005 VPS54Q9P1Q0 977 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 CCPG1Q9ULG6 757 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 ADGRA2Q96PE1 1338 aa14.1□□□□□ -0.15
SCARB1-204ENST00000535005 NAPAP54920 295 aa14.09□□□□□ -0.15
SCARB1-204ENST00000535005 RIOX2Q8IUF8 465 aa14.09□□□□□ -0.15
SCARB1-204ENST00000535005 CPXCR1Q8N123 301 aa14.09□□□□□ -0.15
SCARB1-204ENST00000535005 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
SCARB1-204ENST00000535005 MAF1Q9H063 256 aa14.09□□□□□ -0.15
SCARB1-204ENST00000535005 ZMYND12Q9H0C1 365 aa14.09□□□□□ -0.15
SCARB1-204ENST00000535005 MRPL11Q9Y3B7 192 aaKnown RBP14.09□□□□□ -0.15
SCARB1-204ENST00000535005 CALML3P27482 149 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 COPB2P35606 906 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 TAF1CQ15572 869 aaPredicted RBP14.08□□□□□ -0.15
SCARB1-204ENST00000535005 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 GLT8D2Q9H1C3 349 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 ZFYVE28Q9HCC9 887 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.15
SCARB1-204ENST00000535005 CA12O43570 354 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 STX6O43752 255 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 MMP1P03956 469 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 GHRHRQ02643 423 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 NPY5RQ15761 445 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 UVSSAQ2YD98 709 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 USH1GQ495M9 461 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 SNRNP48Q6IEG0 339 aaKnown RBP14.08□□□□□ -0.16
SCARB1-204ENST00000535005 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 DAGLBQ8NCG7 672 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 CLEC4DQ8WXI8 215 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 PRIMPOLQ96LW4 560 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 CFHR5Q9BXR6 569 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 MTMR6Q9Y217 621 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
SCARB1-204ENST00000535005 SMCO2A6NFE2 343 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 H3BQV1 296 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 OPLAHO14841 1288 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 TLR2O60603 784 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms