RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PFKLP17858 780 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 ENDOUP21128 410 aaKnown RBP5.68□□□□□ -1.5
USP48-215ENST00000534705 GUCY2CP25092 1073 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 POLR2BP30876 1174 aaKnown RBP5.68□□□□□ -1.5
USP48-215ENST00000534705 GIPRP48546 466 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
USP48-215ENST00000534705 NBPF12Q5TAG4 269 aaPredicted RBP5.68□□□□□ -1.5
USP48-215ENST00000534705 SMARCC1Q92922 1105 aaPredicted RBP5.68□□□□□ -1.5
USP48-215ENST00000534705 TCTN2Q96GX1 697 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 DHRS1Q96LJ7 313 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 SLC9A7Q96T83 725 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 TAF6LQ9Y6J9 622 aa5.68□□□□□ -1.5
USP48-215ENST00000534705 TMEM82A0PJX8 343 aa5.67□□□□□ -1.5
USP48-215ENST00000534705 ACRP10323 421 aa5.67□□□□□ -1.5
USP48-215ENST00000534705 TNFRSF1AP19438 455 aa5.67□□□□□ -1.5
USP48-215ENST00000534705 FCRL2Q96LA5 508 aaPredicted RBP5.67□□□□□ -1.5
USP48-215ENST00000534705 SRRTQ9BXP5 876 aaKnown RBP5.67□□□□□ -1.5
USP48-215ENST00000534705 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
USP48-215ENST00000534705 SLC12A7Q9Y666 1083 aa5.67□□□□□ -1.5
USP48-215ENST00000534705 EIF6P56537 245 aaKnown RBP5.66□□□□□ -1.5
USP48-215ENST00000534705 ADAM17P78536 824 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 CYP4F8P98187 520 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 GNL2Q13823 731 aaKnown RBP5.66□□□□□ -1.5
USP48-215ENST00000534705 TARBP2Q15633 366 aaKnown RBP5.66□□□□□ -1.5
USP48-215ENST00000534705 NBPF9Q3BBW0 867 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 TMEM192Q8IY95 271 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 SLC6A18Q96N87 628 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 CRBNQ96SW2 442 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 CAPN10Q9HC96 672 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 IRS2Q9Y4H2 1338 aa5.66□□□□□ -1.5
USP48-215ENST00000534705 FADS2P1A8MWK0 482 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 SYPP08247 313 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 NASPP49321 788 aaPredicted RBP5.65□□□□□ -1.5
USP48-215ENST00000534705 PMS1P54277 932 aaKnown RBP5.65□□□□□ -1.5
USP48-215ENST00000534705 NR1I3Q14994 352 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 BBS9Q3SYG4 887 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 HSF5Q4G112 596 aaPredicted RBP5.65□□□□□ -1.5
USP48-215ENST00000534705 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 FBXW10Q5XX13 1052 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 CCDC81Q6ZN84 652 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 SHDQ96IW2 340 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 TINF2Q9BSI4 451 aa5.65□□□□□ -1.5
USP48-215ENST00000534705 A0A1W2PQ45 241 aaPredicted RBP5.64□□□□□ -1.51
USP48-215ENST00000534705 A0A1W2PQY0 241 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 NUDT19A8MXV4 375 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 SIGLEC6O43699 453 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 PRKCAP17252 672 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 ATF4P18848 351 aaPredicted RBP5.64□□□□□ -1.51
USP48-215ENST00000534705 IGFBP6P24592 240 aaPredicted RBP5.64□□□□□ -1.51
USP48-215ENST00000534705 NCKAP1LP55160 1127 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 ZC3H14Q6PJT7 736 aaKnown RBP5.64□□□□□ -1.51
USP48-215ENST00000534705 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 VPS37DQ86XT2 251 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 SLC16A11Q8NCK7 471 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 PHAXQ9H814 394 aaKnown RBP5.64□□□□□ -1.51
USP48-215ENST00000534705 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
USP48-215ENST00000534705 MATN3O15232 486 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 FKTNO75072 461 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 MAPKAPK2P49137 400 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 LIPIQ6XZB0 460 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 UNC5AQ6ZN44 842 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 SLC43A3Q8NBI5 491 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 SORCS2Q96PQ0 1159 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 MKRN2Q9H000 416 aaKnown RBP5.63□□□□□ -1.51
USP48-215ENST00000534705 TNFRSF12AQ9NP84 129 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 SUSD2Q9UGT4 822 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 ZNF214Q9UL59 606 aaPredicted RBP5.63□□□□□ -1.51
USP48-215ENST00000534705 PCDHB12Q9Y5F1 795 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 SCRIBQ14160 1630 aa5.63□□□□□ -1.51
USP48-215ENST00000534705 C1QTNF3-AMACRE9PGA6 284 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 FSHBP01225 129 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 CASP7P55210 303 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 ANKRD39Q53RE8 183 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 CPZQ66K79 652 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 RPTNQ6XPR3 784 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 RUFY4Q6ZNE9 571 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 C7orf61Q8IZ16 206 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 NUP43Q8NFH3 380 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 CPLX3Q8WVH0 158 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 PRDM14Q9GZV8 571 aa5.62□□□□□ -1.51
USP48-215ENST00000534705 GPR55Q9Y2T6 319 aaPredicted RBP5.62□□□□□ -1.51
USP48-215ENST00000534705 OVOL3O00110 214 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 SHOXO15266 292 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 ITGB3P05106 788 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 FGRP09769 529 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 MSL3P1P0C860 447 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 LIMS1P48059 325 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 AUHQ13825 339 aaKnown RBP5.61□□□□□ -1.51
USP48-215ENST00000534705 ZYXQ15942 572 aaKnown RBP5.61□□□□□ -1.51
USP48-215ENST00000534705 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 ZPBP2Q6X784 338 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 SLCO6A1Q86UG4 719 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 PPFIBP1Q86W92 1011 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 CCDC144CPQ8IYA2 1237 aa5.61□□□□□ -1.51
USP48-215ENST00000534705 ZNF512BQ96KM6 892 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms