RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 TMEM221A6NGB7 291 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 M0R296 226 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 KRT37O76014 449 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 RFC2P35250 354 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ERVK-21P61565 698 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 WDR5P61964 334 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 NKX3-2P78367 333 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 RNF135Q8IUD6 432 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 EDAQ92838 391 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CTDP1Q9Y5B0 961 aaPredicted RBP12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MCM3APO60318 1980 aa12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 H0Y858 1186 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MYL3P08590 195 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CHMP4BP1P59074 171 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 HERC4Q5GLZ8 1057 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PRRX2Q99811 253 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SEZ6LQ9BYH1 1024 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TECTAO75443 2155 aa12.34□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MAGEB6P1A0A0J9YX57 407 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 RGS20O76081 388 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TCEAL5Q5H9L2 206 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TRIM67Q6ZTA4 783 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ASCL5Q7RTU5 278 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ERMP1Q7Z2K6 904 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CERS3Q8IU89 383 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 SDR42E1Q8WUS8 393 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 RAD9AQ99638 391 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 NOD1Q9Y239 953 aa12.33□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 E9PSI1 815 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ZBED4O75132 1171 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ID4P47928 161 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 RIF1Q5UIP0 2472 aaKnown RBP12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CACNA1BQ00975 2339 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TET1Q8NFU7 2136 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 GJB5O95377 273 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PTPROQ16827 1216 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 NBPF20Q3BBV1 942 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 BMP8AQ7Z5Y6 402 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 FBXL6Q8N531 539 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CTNNA3Q9UI47 895 aa12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 BFSP2Q13515 415 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TCTN1Q2MV58 587 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 DCP1AQ9NPI6 582 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 EPG5Q9HCE0 2579 aa12.3□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 STXBP3O00186 592 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 KDM4AO75164 1064 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CSPG5O95196 566 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CDK8P49336 464 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 DLX2Q07687 328 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PKN1Q16512 942 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 IQSEC1Q6DN90 963 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 TAPT1Q6NXT6 567 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MRS2Q9HD23 443 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms