RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 CYP2D7A0A087X1C5 515 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 E7EWF7 191 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 SMIM22K7EJ46 135 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 WNT10BO00744 389 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 C2CD2LO14523 706 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 DDNO94850 711 aaPredicted RBP7.25□□□□□ -1.25
CMTM1-220ENST00000534143 FGRP09769 529 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 TDO2P48775 406 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 GSK3AP49840 483 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 RBM5P52756 815 aaKnown RBP eCLIP7.25□□□□□ -1.25
CMTM1-220ENST00000534143 MARSP56192 900 aaKnown RBP7.25□□□□□ -1.25
CMTM1-220ENST00000534143 HAND2P61296 217 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 TNP2Q05952 138 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 PPARAQ07869 468 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 COL9A3Q14050 684 aaPredicted RBP7.25□□□□□ -1.25
CMTM1-220ENST00000534143 KRT32Q14532 448 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 RABEP1Q15276 862 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 DLGAP5Q15398 846 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
CMTM1-220ENST00000534143 SH3PXD2AQ5TCZ1 1133 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 C12orf60Q5U649 245 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 TBC1D10CQ8IV04 446 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 MAPKAPK5Q8IW41 473 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 NEK1Q96PY6 1258 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 MYOZ2Q9NPC6 264 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 GPRC5DQ9NZD1 345 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 FLT1P17948 1338 aa7.25□□□□□ -1.25
CMTM1-220ENST00000534143 MINDY4BA8MYZ0 360 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 RNF225M0QZC1 329 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 OIP5O43482 229 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ENTPD3O75355 529 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 EGFRP00533 1210 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 CYP2D6P10635 497 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 MAPTP10636 758 aaKnown RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 BMP4P12644 408 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 PSMA5P28066 241 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 HIRAP54198 1017 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 EXOSC10Q01780 885 aaKnown RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 NFIAQ12857 509 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 NBPF9Q3BBW0 867 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 AKNAD1Q5T1N1 836 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 FKBP1CQ5VVH2 108 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ZFPM1Q8IX07 1006 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 STAG1Q8WVM7 1258 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 SNX21Q969T3 373 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 JAKMIP1Q96N16 626 aaKnown RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 TTC14Q96N46 770 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 OSBPL5Q9H0X9 879 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ALDH8A1Q9H2A2 487 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 INCENPQ9NQS7 918 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 MCM9Q9NXL9 1143 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ARPP21Q9UBL0 812 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ZNF70Q9UC06 446 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 GDF2Q9UK05 429 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 GPC6Q9Y625 555 aaPredicted RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 SIPA1L1O43166 1804 aa7.24□□□□□ -1.25
CMTM1-220ENST00000534143 POLR2AP24928 1970 aaKnown RBP7.24□□□□□ -1.25
CMTM1-220ENST00000534143 ROBO3Q96MS0 1386 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 GLTPD2A6NH11 291 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 H7C1D1 291 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 KHNYNO15037 678 aaKnown RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 ORC4O43929 436 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 PCP11498 1178 aaKnown RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 CPA1P15085 419 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 CASTP20810 708 aaKnown RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 RPS6KB1P23443 525 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 EPS15P42566 896 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 PLCD1P51178 756 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 NEK4P51957 841 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 CACNB3P54284 484 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 GABPAQ06546 454 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 DPYDQ12882 1025 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 BLOC1S2Q6QNY1 142 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 RUFY3Q7L099 469 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 DHX32Q7L7V1 743 aaKnown RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 MB21D2Q8IYB1 491 aaPredicted RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 NCOA7Q8NI08 942 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 SCARF2Q96GP6 870 aaPredicted RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 UPF3BQ9BZI7 483 aaKnown RBP7.23□□□□□ -1.25
CMTM1-220ENST00000534143 ZMYND15Q9H091 742 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 PGAP2Q9UHJ9 254 aa7.23□□□□□ -1.25
CMTM1-220ENST00000534143 SAP30BPQ9UHR5 308 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms